Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02072 CAGGATTGTTTGGGTAGAAGCAAGGAATGAAGAGAAGGTTGTAGAAGACAGAAGAGCTCGCTGCGAAGTGCGGATTCGTTTATTGAAAGAAAGAATAGAAGAATATATATATATATTTGCACTGTGGAAAGCACGTTAAGGAGGACGCGACGGTGGAATGGCGACGGCGGTGGAGAAGAAAGCGAAGGAAGCATTCTTCGACGACGAGTTCGCTCTGGCCGTTGATCTCTACTCCGAAGGCATACAATTGGATCCCAACGACGCTAATCTCTTTGCGGACCGGGCCCAAGCCCATATTAAGCTCAACGCTTTCACCGAAGCCGTTGCTGACGCCAACAAAGCCATCCAATTAGACCCTTCCTTGACCGCTTGTATCAAGCTCGAAGAATATCACACTGCCAAGGTAGCACTGCAAAAAGGTGCCGCTTTTGCGCCACATGATTCCAGATTCCCCAACTTGATTCAACAATGTGATCGCTGCATTGCAGAGGAATCAAATGGTCTTACTACCTCTGAGTTGTCAAATGCATCCATAACATCTGTAACATCGGGTAATGGTTCCCATTTGAGTAGTACGAATGATGGGATGACTAAAGAAGCTGAAGGACACAGTTTGGTATCCCAAATCAACGAAATCACGCTAAACAGACCAAAATACAGACATGAATACTACCAGAAGCCAGAAGAAGTCGTTGTGACAATATTTGCAAAAGGAATATCAGCAAAAGATGTGGTTGTTGATTTTGGTGAACAGATTGTACGTTTATATAATCGGGGCTTCATATTTCCCCTTTATTTTTGCTTTTCTTTTTCATGTTTTACATATATAACTCTCCAGATAACTGGAAGTACTTTAACATTGCAGCTAAGTGTTACTCTTGATGTTCCTGGTCAAGATGCCTATCATTATCAACCTCGATTGTTTGGGAAGATAATACCCAATAACTGCAGAATTGAGGTGTTGTCAACCAAAATTGAAATTCGTCTTGCAAAAGCTGAAGCTATTAATTGGACAACTCTGGAATATAGCAAAGATACACTTCCCCCTAAAATAAATATGCCTATGGTTCCATCTGAAAGGCCTGCATATCCATCATCAAAACCGAGGACAAGAGATTGGGATAAGTTGGAAGCTCTAGTGAAAAAAGAGGAGAAAGAAGAAAAGCTTGATGGTGATGCTGCTTTGAATAAATTGTTCCGAGATATTTACCAAAATGCAGATGAGGACATGAGGAGAGCAATGAGCAAGTCTTTTTTGGAGTCGAATGGAACAGTGCTATCAACGGATTGGAAAGAAGTGGGATCAAAGAAAGTAGAAGGCAGTCCTCCAGAAGGTATGGAATTGAAAAAATGGGAGTATTGAGTCGGTACTCAAATATGTAACTGATGATTTGAGAGTTCAAGTTTGTCACCTTCAAACCTCCTGCCAAAAAAATAAACGCATAAAGAAAAAAAATATTCTGTAATCTCTTATATTGTTCAAGAGTAATTACCGGAGAATGACCTAATTTGCTATCGCTGTGGAAGTGGATTTTATTTTGTTGGGATGATTATATATTAATGGTAAACATGACGAAAATCGGACTTTATTTTTTATTTCATTTTCTGAATTATAGATATTGGAAATATATGAAGATCAGCATTATCAAAGATGCTCCCTTCACGTTAACATTTGAATTTGGCG 1684 0.3973 MATAVEKKAKEAFFDDEFALAVDLYSEGIQLDPNDANLFADRAQAHIKLNAFTEAVADANKAIQLDPSLTACIKLEEYHTAKVALQKGAAFAPHDSRFPNLIQQCDRCIAEESNGLTTSELSNASITSVTSGNGSHLSSTNDGMTKEAEGHSLVSQINEITLNRPKYRHEYYQKPEEVVVTIFAKGISAKDVVVDFGEQIVRLYNRGFIFPLYFCFSFSCFTYITLQITGSTLTLQLSVTLDVPGQDAYHYQPRLFGKIIPNNCRIEVLSTKIEIRLAKAEAINWTTLEYSKDTLPPKINMPMVPSERPAYPSSKPRTRDWDKLEALVKKEEKEEKLDGDAALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVEGSPPEGMELKKWEY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02072 401 Gene3D - 161 300 IPR008978 -
Pste1g02072 401 MobiDBLite consensus disorder prediction 381 401 - -
Pste1g02072 401 SUPERFAMILY HSP20-like chaperones 241 379 IPR008978 -
Pste1g02072 401 ProSiteProfiles CS domain profile. 164 289 IPR007052 -
Pste1g02072 401 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Pste1g02072 401 CDD p23_CS_SGT1_like 170 289 - -
Pste1g02072 401 Pfam SGS domain 319 399 IPR007699 -
Pste1g02072 401 SUPERFAMILY TPR-like 3 105 IPR011990 GO:0005515
Pste1g02072 401 SUPERFAMILY HSP20-like chaperones 164 204 IPR008978 -
Pste1g02072 401 PANTHER PROTEIN SGT1 HOMOLOG 236 399 IPR044563 GO:0051087
Pste1g02072 401 SMART tpr_5 36 69 IPR019734 GO:0005515
Pste1g02072 401 SMART tpr_5 2 35 IPR019734 GO:0005515
Pste1g02072 401 ProSiteProfiles SGS domain profile. 310 401 IPR007699 -
Pste1g02072 401 Pfam CS domain 168 203 IPR007052 -
Pste1g02072 401 Pfam CS domain 226 279 IPR007052 -
Pste1g02072 401 Gene3D Tetratricopeptide repeat domain 1 125 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02072 Pste-Chr1 6486793 6490961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02072 1 65 U-box Gene Family AT3G07370 35.385 4.11e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02072 1 6486793 6490961 Pste1g02072 1 6486793 6490961 ECH