Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02055 CCACCACACCACACTCTTCACTCTTGAGTACTACTCAAAGTCTCAAACACAAGTAGTGTATAGTGTATACCCATACCCACAGTACAAACTACACACACCTCAACTCAAAACCCCGTAACCGCTAATTAACGTCCCTATATATCTCAGCTGCTGTTTTTGGCGGCACCAAAACGGCTTCTCTCCACTCTCTTCCATCCACACTCTCCACTTAACCTCTCCAAACCAAATCTTTCTCTAGATTTCCTACTATTTAGCGGTAACATAAACAAGTTAAGTTAACTTTGAGACATTTCAATGGGGCGTTCTGGCGGTGACACCTTTTTTTCTTTGTCTAGCCTCATGTGTGAAGAAGGAGAAACTGGATTCTTTGAAGACCGAGACGACAATCCTTGCATTATTGACTCTCTTGAAAACCCGTGTTTTGTTTTGGAAGATGAAGAGAAATATATTGAGTATTTGTTCAAACAAGAAATGGGATTTGGATCCCAGAATCACAACTTTTTTGCTGCTGATGATAACTCTAACAGACACTGGTTGAGAAGTGCCCGTGTGGATGCCATTGACTGGATTTTCAATACACAAGCAAAAATTGGGTTCAAAGTTGAGACAGCCTATTTATCAGTGACTTACTTTGATCGGTTTCTATCGAAGCGATCCATTGATGAATCGAAACCTTGGGCTGTTCAATTATTATCAGTGGCATGTTTATCTCTAGCAGCAAAGATGGAAGAGCAAAATGTGCCTGTTCTATCTGAGTATCCGATGGAAGAATATCGCTTTGAGAACAAAGTAATTAAGAACATGGAGCTTATGATTCTGAGTACGTTGGAATGGAAAATGGGATCAGCAACTCCTTTTTCCTATTTGCATTACTTTGTCGGCAAGTTCTGTCCTGGATCCAGACCGCAAGCAATAATCACAAAAGCCATTGAACATATTGTGGCCATGGTTAAAGATGTTAATTTGATGGATCAGAGACCATCTATCATTGCCTCGGCTGCCATATTGGCAGCTTTTGATATTAGATTAACAAGAAAGACCATGAATCTTCGAATAAGTGTAATCTCATCCTGGGGAAATCTAGAAAGTGAACATGTGTTTTTATGTTACAATCTAATACAGGAAATGAGGAAAAGCAAAGTTAAGACTCCTTGCTCGAATTTGTTGTCTACCCAGACAAGCTCCACGTGTGTTATTGAGAACCAATCTGACACTTCTTTGGGAGCTAAGAGAAAACTTAGTTTTGAGGACAGTGAAAATTGTGGTGAACATAAGCTACATCGGTCTTAGTTTGCTGCACCTGCAGCAGAGTATGTGATCTTAATCAATACAGGAAAATTGATTGGATTGGATTATAGGATATTTTTTCACTGAAAATTTATTCTTGTTAGTTATAGGGCTAATGAGTGTCATCCACCATTTTGTGGAATTATTTGGTATTCATGATTGGGGATTTATTTCTGGGTACCCAACAAAAAGTTACAGCCAGTGACAACAAAGAAGATAGAG 1509 0.3917 MGRSGGDTFFSLSSLMCEEGETGFFEDRDDNPCIIDSLENPCFVLEDEEKYIEYLFKQEMGFGSQNHNFFAADDNSNRHWLRSARVDAIDWIFNTQAKIGFKVETAYLSVTYFDRFLSKRSIDESKPWAVQLLSVACLSLAAKMEEQNVPVLSEYPMEEYRFENKVIKNMELMILSTLEWKMGSATPFSYLHYFVGKFCPGSRPQAIITKAIEHIVAMVKDVNLMDQRPSIIASAAILAAFDIRLTRKTMNLRISVISSWGNLESEHVFLCYNLIQEMRKSKVKTPCSNLLSTQTSSTCVIENQSDTSLGAKRKLSFEDSENCGEHKLHRS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02055 331 PANTHER CYCLINS 47 282 IPR039361 -
Pste1g02055 331 Pfam Cyclin, N-terminal domain 52 182 IPR006671 -
Pste1g02055 331 CDD CYCLIN_AtCycD-like_rpt1 84 180 - -
Pste1g02055 331 SMART cyclin_7 90 176 IPR013763 -
Pste1g02055 331 SUPERFAMILY Cyclin-like 39 182 IPR036915 -
Pste1g02055 331 FunFam Uncharacterized protein 184 248 - -
Pste1g02055 331 Gene3D - 184 254 - -
Pste1g02055 331 FunFam Cyclin-D5-1 80 183 - -
Pste1g02055 331 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Pste1g02055 331 Gene3D - 78 183 - -
Pste1g02055 331 Pfam Cyclin, C-terminal domain 186 286 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02055 Pste-Chr1 6446906 6448803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02055 11 265 Core Cell Cycle Gene Families AT4G37630 35.075 4.31e-46 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02055 1 6446906 6448803 Pste1g02055 1 6446906 6448803 ECH