Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02039 GAGAATCAGAGGGACCAAACACAAACAAGTAATGAAATTAACTTCCTCTGTTCCAATTTCCTAACTTGAAAGCCAAACAAAACAAACGGGGTTTCACAAATGGAACGAGAAAGTAACGTAAAAATCTAAACTGGGCAAAGAAATCAAAGCTTAGCCTTTCAATTTGAGAGAAGAGTGGGGACTGGAGAATAGGGAGTGATGGCGAAGTAGATCTGAAAGGTGAAGAATTTCAGTAGGTAGAGCCCAAAGTTTTCAACTTTGAATCAAAGGGTCATCAAATGCTTTAACGCTTTTGTTTTTCTGGCTTCCGACACCTTCACAAAATGCCGAACACTTCTTTCCACAAGCTTCTTCTACCTTCCACTGTCCAACCCAACCAACTGAGGCTTCCAGATAATTTTATGAGGAAATATGGGGGTGAACTCTCTCCAATTGTTACCCTATCTGTTCCTGATGGTAGTGACTGGCGTGTAGGATTGAAAAAGGCAGACAACAAATATTGGTTGCTTGATGGTTGGCAAGAATTTGTTCAACGCTATTCCATTAGTGTTGGATACTTATTGGTGTTCAAATACGAAGGAAAGTCATCATTCAAGGTTCATATTTTTAATGTGGCTACTTCTGAAATAGACTATCAATCAGCTATGAGAAGCAGTAATGAAGGGACTCACTTTGCAAATCGTCTTAAATGTTTTGAAGAAATGGAAGATGAAGATTCCATTGAAATATCGGATTCATCACCTTCCCACCTTGCTCCGGGCTCATTGCAAAATAAAGCTCTTGCTGGATCAGTAGATAAAATGACGCCTGGAAAGAGTTACACAGCTCCAGCATTGCAGAATCTGTTCAATGGGTCTAAACTTAATAGCATAAAGTGGGGAGAGGGTAGCAATGCCCATTCCATCAGAAGTGGCAACTCACTAGATAACCGGTTGACCAGAGACATAGGACTTCAGTTTAATGCAGTCGAGTTTAAAAGATCTACTGAAGAATTAAAATTGCGCGCTTCCATTGAGGAAAGAATGAAAAAAACTGCCAGAAAGAAGCGGAAATCAGATGGCCAGGAACCCTCTGCTGAACATGGAGAGGAGGTAGAAATGCGGTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACTGTGACAGCAGAAGAAAGAGAAAGGGCCATCAACGCAGCAAAAGCATTTGAACCACCTAACCCTTTCTGTCGGGTTGTCCTGCGGCCCTCCTATTTATATAGGGGATGCATAATGTATTTGCCATCCTGCTTTGCAGAAAAGCATTTGAATGGAGTTTCAGGGTTTATTAAACTTCAGATCTCTAACGGGAGACAGTGGCCGGTTCGGTGCCTTTATAGAGGAGGTAGAGCTAAGTTAAGCCAGGGGTGGTTTGAATTTTCATTAGAGAATAATTTAGGGGAAGGTGATGTCTGTGTGTTTGAGCTGCTTAGAATGAAAGAAGTAGTGCTGCAAGTTACTGTTTTTCGTGTTGACGTGGGATTGTTGACCCTTCCTTTGCAGCAGAACCAAAACATGAGCTCAGCTAAACTTCTCAACACTCCCTTGCAGCCACACCTCACTTCACCTAAACTGCTTAGAAATTAGCAGCACCTTCATTCCTGATTCCCGAATCCTGATACCTCAACTGTATCAAAATAACCCCTTACTTCTGTCTGAAACTAAAATACTTTTTCTGTCCAACAGATCACGCTGACTTAAATGGAACATAGTTATTATAGTTTTGACATCTTTTCTTTCCCCTTTTGACTTGGGTTGTACATAGATTGTTTAATCTAGCTAGAAACCGAGTCAATGCTTGCCCTATTGTTCTTTATCTTGGTTTTAATCTTTCTTTTTTTTTTTTCGTAAGATAAATTATATAACTTCTCCTGCATGACGGCTTTCTT 1909 0.4034 MPNTSFHKLLLPSTVQPNQLRLPDNFMRKYGGELSPIVTLSVPDGSDWRVGLKKADNKYWLLDGWQEFVQRYSISVGYLLVFKYEGKSSFKVHIFNVATSEIDYQSAMRSSNEGTHFANRLKCFEEMEDEDSIEISDSSPSHLAPGSLQNKALAGSVDKMTPGKSYTAPALQNLFNGSKLNSIKWGEGSNAHSIRSGNSLDNRLTRDIGLQFNAVEFKRSTEELKLRASIEERMKKTARKKRKSDGQEPSAEHGEEVEMRFRFYESASARKRTVTAEERERAINAAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISNGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLQVTVFRVDVGLLTLPLQQNQNMSSAKLLNTPLQPHLTSPKLLRN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02039 427 PANTHER B3 DOMAIN-CONTAINING 5 383 - -
Pste1g02039 427 Gene3D - 1 98 IPR015300 -
Pste1g02039 427 SMART B3_2 6 98 IPR003340 GO:0003677
Pste1g02039 427 SMART B3_2 296 391 IPR003340 GO:0003677
Pste1g02039 427 Pfam B3 DNA binding domain 299 389 IPR003340 GO:0003677
Pste1g02039 427 Pfam B3 DNA binding domain 6 96 IPR003340 GO:0003677
Pste1g02039 427 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Pste1g02039 427 SUPERFAMILY DNA-binding pseudobarrel domain 289 390 IPR015300 -
Pste1g02039 427 SUPERFAMILY DNA-binding pseudobarrel domain 2 96 IPR015300 -
Pste1g02039 427 CDD B3_DNA 294 389 IPR003340 GO:0003677
Pste1g02039 427 CDD B3_DNA 5 96 IPR003340 GO:0003677
Pste1g02039 427 Gene3D - 273 391 IPR015300 -
Pste1g02039 427 ProSiteProfiles B3 DNA-binding domain profile. 296 391 IPR003340 GO:0003677
Pste1g02039 427 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02039 Pste-Chr1 6370546 6374051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02039 1 391 B3 DNA Binding Superfamily AT3G18990 51.908 2.84e-131 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste1g02039 B3 1e-15 CL0405