Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02037 TCACAACGAGGAAGGGTTGGTTTTCGCATTCAACCAGCTTTATGTAAACGAAAATATCATAAAGTGGACTATAGACAGTAGCGGACAGAGGAGGAAAAAAAGCTAAAGAAGATTGGTCATGGCTTCTTCAATGAGGATCTCAAAGCTGCTCTCTCGTTCTTTTCTTTCTGCTTCCACTACTTCTTTGTTTTCTAGAGGTGGAAGTGGTGCTCTAGGTACAGGGCTCAGTAGATTCAGCACAGCCACTGCCATTGAAGAACCAATTAAACCACCAGTTCAAGTAGAGCACACACAACTATTAATTGATGGAAAATGGGTTGATGCAGCTTCTGGCAAAACTTTTCCAACCTTGGACCCGAGGACAGGAGGTGTGATTTCTCATGTTGCTGAGGGTGACCGTGAAGATGTTGATCGAGCAGTTGCAGCTGCTCGCAAAGCCTTTGACCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTTGAAAAGCACAATGACGAGCTTGCTGCCCTTGAAACTTGGGATAGTTGGGCAGATAAGATTCATGGTCTCACGGTTCCAGCTGATGGGCCATATCACGTGCAAACATTGCATGAACCCATTGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCCTGGAAGGTTGGTCCAGCATTGGCCTGTGGTAACACTATTGTTCTCAAAACAGCTGAGCAGACTCCATTATCTGCGTTGTATGCATCAAAGTTGCTTCATGAGGCTGGACTTCCTCTTGGTGTTCTGAATGTAGTATCTGGCTTTGGTCCAACAGCTGGTGCTGCTATTGCTAGTCACATGGACATAGATAAGCTTGCTTTCACGGGTTCAACCAACACTGGAAAAGTTGTCCTTGAACTGGCAGCTAGAAGCAATCTTAAGCCTGTAACTTTGGAGCTTGGTGGGAAGTCCCCTTTTATTGTATGTGAAGATGCTGACGTAGATGAGGCTGCTGAGCTAGCACACTTTGCTTTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTAGAACATTTGTCCACGAACGTGTGTACGATGAGTTTATTGAGAAAGCAAAAGCACGTGCTTTGAAGCGTGCTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATACTGAAGTACATTAAATCCGGTGTTGAAAGTGGAGCTACACTTGAAACTGGAGGAGATAGATTTGGCTACTCGGGCTTCTATATTCAGCCTACTGTTTTCTCAAATGTTAAGGATGACATGCTGATTGCAAAAGAAGAGATCTTTGGCCCAGTGCAATCCATATTAAAATTCACGGACCTTAATGAAGTGATTCAAAGAGCAAATAACACACCTTATGGCCTAGCAGCAGGGGTGTTCACGAAAAACATTAACACAGCTAACACTTTGACTAGAGCATTGAGAGTTGGAACAGTGTGGGTGAACAGCTTTGACACATTTGATGCAGCAATTCCCTTTGGAGGATACAAGATGAGTGGGCACGGAAGAGAAAAAGGAGAATACAGTCTCAAGAACTACTTGCAAGTGAAGGCAGTTGTTACATCCTTGAAGAACCCAGCTTGGCTTTGAACAACATTAGCTTTAGGTTTATTTGATGAAAAGAAGATTAATAAAAAGGATTCAAGAAAAAGATCATTATATTGGGTTATTTCACTCATAGTATCTATGTTGAATAATGAATATAATTACTATCTAGTTTCATTTTCTGTTTTTGCCCCTGTATTTTATGGATAGCGCGAAATATACTATGGAGTAAAATTCAACGTAGAGGTGTATGTCTGGCAGGGATGGGAATAAAATTTGCATATTGGTGAATGTAAACCTCATGCTACCTGTTCTCAGACAACTCATTATTCCTTTTTAGTAAATGGAAATATTATGCTTCATCTGTGATTCAAC 1993 0.421 MASSMRISKLLSRSFLSASTTSLFSRGGSGALGTGLSRFSTATAIEEPIKPPVQVEHTQLLIDGKWVDAASGKTFPTLDPRTGGVISHVAEGDREDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLFEKHNDELAALETWDSWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPLGVLNVVSGFGPTAGAAIASHMDIDKLAFTGSTNTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAAELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIKSGVESGATLETGGDRFGYSGFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFTDLNEVIQRANNTPYGLAAGVFTKNINTANTLTRALRVGTVWVNSFDTFDAAIPFGGYKMSGHGREKGEYSLKNYLQVKAVVTSLKNPAWL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02037 514 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 284 511 IPR016163 GO:0016620
Pste1g02037 514 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 308 319 IPR016160 GO:0016491
Pste1g02037 514 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 147 504 - -
Pste1g02037 514 FunFam Aldehyde dehydrogenase, mitochondrial 145 307 - -
Pste1g02037 514 FunFam Aldehyde dehydrogenase, putative 476 502 - -
Pste1g02037 514 SUPERFAMILY ALDH-like 54 508 IPR016161 GO:0016491
Pste1g02037 514 FunFam Mitochondrial aldehyde dehydrogenase 2 286 475 - -
Pste1g02037 514 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 147 283 IPR016162 GO:0016491
Pste1g02037 514 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 280 287 IPR029510 GO:0016491
Pste1g02037 514 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 38 146 IPR016162 GO:0016491
Pste1g02037 514 Pfam Aldehyde dehydrogenase family 147 504 IPR015590 GO:0016491
Pste1g02037 514 Pfam Aldehyde dehydrogenase family 66 146 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02037 Pste-Chr1 6364128 6368312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02037 3 514 Aldehyde Dehydrogenase Gene Family AT3G48000 73.792 0.0 815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02037 1 6364128 6368312 Pste1g02037 1 6364128 6368312 ECH
Pste1g02037 1 6364128 6368312 Pste7g00689 7 6291920 6296328 PCT