Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02033 AAGTTTGTGTGGACTGTGGAGGAGGGAAGTAACAAAAGAAATTCACCATCAAATAATATCAACACATCTCACGCATCAATATCAACCTTAGTTGAGCCGAATCGAGTGACCCTCTCTTCTCCTTCATGGCTCCATTCCTGTTCCGTCACCTTCTCCCACCACTCACGTCACCGTCTCCGGCCACTCGCGTCACCCTCTCCGACGACTCTCTTGCACCACCTACACTCAGGGTGCCTGATGTTGTGGAATAGCTTGATGACTACTGGAAAATATCCTGACTTTTTCAAAGTGTACCTTCCAGAGCAACACTCTGAAAGAATGCTTATTCCAAATGCTTTAGTAAAGTTGTCTGAGTCACAAGGAATGATCCCCGAGGATGTTATACTGAGAAATGCTAGTGGGGGAGTGTGGCATATCAAAACACGATATATTGGAGACAAACTATATTTGGATGATGGGTGGAAAGCTTTTCAAGAAGAAAACTACTTAGGAAAAGCAGATTTTCTGGTCTTCAAGCATGAGAGGAGTAATGAGTTTAAGGTAATAATCCTTGAACTATCAACTCAGTGTGAGAAGACACTGGTAAAAATGGAGGAGGAGAATGAAGAAGATCAAGCACCAGCACAACAAGTTCAGGAGGCAAAGATGATGGAAGAGGAAGATGAAGGGGCAGAGGACTGTGACATAGAGAGCGAGAAAGACACTGATGAAGACGACTATCACACAGAGATGGAGAAAGAGGTTGAAGAAGAACACGATACTGCTCCTGCTGGACACACTAGTCAAAGTTGTGGCAAAGCTTGCAAAAGGGAGATTGCATCAAGTTCCAACCCCAAGGCTAAAGATCCTCTTGAAGGCCATGAATTTGATCCTGAAATCTATATTCAGCCTGAGAATCAATTTTTTAAAGCCAAGCTCTACAAAAATAGACCCAACGAATTGGATATGCCATTCAAAATTTTTCCCTTACTTTCGCTGAAAAAGTCACCCTTATATGTTGCCAATGCTACCAGCTTCAGACACCAATTGCGAGATTATCATCGCAACCTGGCACAACAGGCACCTATCCGCAAGAAATATTTGGAAGTGACAGGAAAAGTGTGTAGTTGGCAAGATGGTAGAATATGTATCAAGGGTTGGGCAGACTTTAGTAGAAGGAACAAGATAAAAAAAAGTGATGTATGCTTCTGTGAAGTTACATTAGGGGAAGACCAAGTAGCAAGAACACTTCATGTG 1236 0.4272 KFVWTVEEGSNKRNSPSNNINTSHASISTLVEPNRVTLSSPSWLHSCSVTFSHHSRHRLRPLASPSPTTLLHHLHSGCLMLWNSLMTTGKYPDFFKVYLPEQHSERMLIPNALVKLSESQGMIPEDVILRNASGGVWHIKTRYIGDKLYLDDGWKAFQEENYLGKADFLVFKHERSNEFKVIILELSTQCEKTLVKMEEENEEDQAPAQQVQEAKMMEEEDEGAEDCDIESEKDTDEDDYHTEMEKEVEEEHDTAPAGHTSQSCGKACKREIASSSNPKAKDPLEGHEFDPEIYIQPENQFFKAKLYKNRPNELDMPFKIFPLLSLKKSPLYVANATSFRHQLRDYHRNLAQQAPIRKKYLEVTGKVCSWQDGRICIKGWADFSRRNKIKKSDVCFCEVTLGEDQVARTLHV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02033 412 MobiDBLite consensus disorder prediction 218 244 - -
Pste1g02033 412 PANTHER B3 DOMAIN-CONTAINING 86 400 - -
Pste1g02033 412 Gene3D - 85 190 IPR015300 -
Pste1g02033 412 ProSiteProfiles B3 DNA-binding domain profile. 92 187 IPR003340 GO:0003677
Pste1g02033 412 MobiDBLite consensus disorder prediction 197 286 - -
Pste1g02033 412 Pfam B3 DNA binding domain 94 182 IPR003340 GO:0003677
Pste1g02033 412 SUPERFAMILY DNA-binding pseudobarrel domain 89 186 IPR015300 -
Pste1g02033 412 CDD B3_DNA 92 184 IPR003340 GO:0003677
Pste1g02033 412 Coils Coil 183 203 - -
Pste1g02033 412 SMART B3_2 94 187 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02033 Pste-Chr1 6353352 6356823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02033 91 412 B3 DNA Binding Superfamily AT5G57720 28.793 9.34e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste1g02033 B3 1.6e-11 CL0405