Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02015 ATGGGGAACTGTAACAGTGAAGCGGCTTCTCAAACGGAACCGCATTGGGAGCATGAGCAACGATCCTCCAACTCCAAAGGCATCACAGTCCTCCCTGCCAATTCAAAGCCCTCAGTGGGCCGAGTTCTGGGCCGGCCCATGGAGGACGTCCGGTCCACGTACATCTTCGGCCGGGAACTGGGCCGCGGGCAGTTCGGCGTCACCTACTCAGTCACCCACAAACACACAAAGGAGCCCTTCGCGTGCAAATCCATCGCCACGCGCAAACTCATCCATCGCGATGACTTGGACGACATCCGCCGCGAGGTGCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTGGAGCTCAAGGGCGCCTACGAGGACCGCCACTCCGTCAACCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGACACTACTCCGAGCGCGCCGCCGCCGACCTCTGCCGCCAGATCGTCACCGTGGTTCACGACTGCCACACCATGGGAGCGATGCATAGGGATCTCAAGCCCGAGAACTTCTTGTTCCTCAGCAAGGATGAGAACTCGCCGCTTAAGGCCACAGATTTCGGGGATGTGTTTAAGGATATTGTTGGGAGTGCTTATTATGTTGCTCCTGAGGTCCTGCGTAGAAGTTATGGACCTGAAGCAGATATTTGGAGTGCCGGAGTTATATTGTTCATTCTGCTCTCTGGTATCCCTCCCTTCTGGGCAGAAAAGGAACGGGGTATCTTTGATGCTATTCTTCGTGGACATATTGATTTTGCATCTGAACCTTGGCCCTCCATATCAAGTAGTGCCAAGGATCTGGTCAAGAAGATGTTACAATCTGACCCCAAACAAAGGCTCTCGGCAGTTGAAGTCCTTAATCATCCTTGGATGCGAGAAGATGGGGCATCTGATAAGCCTTTAGATATTACTGTTTTAACCAGAATGAAACAATTTAGGGCAATGAACAAGCTGAAGAAAGTAGCTCTGAAGGTTATCGCTGAAAACCTTTCTGAAGAAGAAATCATTGGCTTGAAAGAAATGTTTAAATCCATGGACACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCAGGTCTGCCAAAGCTGGGTACTAAGCTTTCCGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTAGACGGAAATGGAACCATTGATTACATTGAATTTATAACAGCTACCATGCACATGAACAGGATGGAAAGAGAGGACCACCTATATAAAGCCTTTGAATATTTTGATAAGGATAGAAGCGGGTACATCACAATGGAAGAGTTGGAATCTGCCCTTAAAAAATATAATATGAGTGATGATAAAACAATAAAGGAAATCATTACTGAAGTTGATACAGACAATGATGGAAGAATTAACTATGAAGAGTTTGTAGCCATGATGAGGAAAGACAATCAAGATTTAGTAACCAACAGACGTCGCAAATAATTAAATTAATTTGATCATAAATTGCCTCTCTTACTGGTTCATACGCAGGAGGCTCAGGCTCTACGCTTTTTTGTGATACGGACTACGTTGCATTCAATTCAACACTCTTTACTCACCTGTTTTACTGTAACAATGTATTTCTCTGCTTCTTTGCGGAACTCATAGGACAATTTACTCCAATTTGTAATTTTAACATATACAGGAATAAAATTTTATCATGGTTCATTAGTAAATGATTTTTC 1733 0.4628 MGNCNSEAASQTEPHWEHEQRSSNSKGITVLPANSKPSVGRVLGRPMEDVRSTYIFGRELGRGQFGVTYSVTHKHTKEPFACKSIATRKLIHRDDLDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAADLCRQIVTVVHDCHTMGAMHRDLKPENFLFLSKDENSPLKATDFGDVFKDIVGSAYYVAPEVLRRSYGPEADIWSAGVILFILLSGIPPFWAEKERGIFDAILRGHIDFASEPWPSISSSAKDLVKKMLQSDPKQRLSAVEVLNHPWMREDGASDKPLDITVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITMEELESALKKYNMSDDKTIKEIITEVDTDNDGRINYEEFVAMMRKDNQDLVTNRRRK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02015 496 FunFam Calcium-dependent protein kinase 5 140 312 - -
Pste1g02015 496 ProSitePatterns EF-hand calcium-binding domain. 431 443 IPR018247 -
Pste1g02015 496 ProSiteProfiles EF-hand calcium-binding domain profile. 346 381 IPR002048 GO:0005509
Pste1g02015 496 CDD STKc_CAMK 54 303 - -
Pste1g02015 496 Pfam Protein kinase domain 56 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02015 496 ProSiteProfiles EF-hand calcium-binding domain profile. 382 417 IPR002048 GO:0005509
Pste1g02015 496 ProSiteProfiles Protein kinase domain profile. 54 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02015 496 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 478 - -
Pste1g02015 496 Gene3D - 329 482 - -
Pste1g02015 496 ProSitePatterns EF-hand calcium-binding domain. 359 371 IPR018247 -
Pste1g02015 496 MobiDBLite consensus disorder prediction 1 39 - -
Pste1g02015 496 Gene3D Transferase(Phosphotransferase) domain 1 141 319 - -
Pste1g02015 496 FunFam Calcium-dependent protein kinase 1 311 486 - -
Pste1g02015 496 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Pste1g02015 496 SMART efh_1 457 485 IPR002048 GO:0005509
Pste1g02015 496 SMART efh_1 386 414 IPR002048 GO:0005509
Pste1g02015 496 SMART efh_1 422 450 IPR002048 GO:0005509
Pste1g02015 496 SMART efh_1 350 378 IPR002048 GO:0005509
Pste1g02015 496 ProSiteProfiles EF-hand calcium-binding domain profile. 418 453 IPR002048 GO:0005509
Pste1g02015 496 Gene3D Phosphorylase Kinase; domain 1 56 140 - -
Pste1g02015 496 ProSitePatterns EF-hand calcium-binding domain. 466 478 IPR018247 -
Pste1g02015 496 Pfam EF-hand domain pair 421 483 IPR002048 GO:0005509
Pste1g02015 496 Pfam EF-hand domain pair 351 411 IPR002048 GO:0005509
Pste1g02015 496 SUPERFAMILY EF-hand 342 486 IPR011992 -
Pste1g02015 496 SUPERFAMILY Protein kinase-like (PK-like) 51 317 IPR011009 -
Pste1g02015 496 ProSiteProfiles EF-hand calcium-binding domain profile. 454 488 IPR002048 GO:0005509
Pste1g02015 496 Gene3D - 320 412 - -
Pste1g02015 496 ProSitePatterns EF-hand calcium-binding domain. 395 407 IPR018247 -
Pste1g02015 496 FunFam Calcium-dependent protein kinase 1 56 139 - -
Pste1g02015 496 SMART serkin_6 54 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02015 Pste-Chr1 6298750 6304500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02015 40 495 EF-hand Containing Proteins AT4G23650 78.495 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste1g02015 Pkinase 6.5e-66 CL0016