Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02012 GCACTAGGGAAAAAACTTCTCACTAATGTTGGAAATTTTAGTAAAAGAAAGAAATAGTCATGAAGGGGACATCTCGCAAGATGAGGGGCGGATGGTGCTGGATGGGTGGAGGAGGTGACCGGCGAGCGCAGATGGGATGAGGCAGAAGAGGACAATATAGGAATTTTTCACATTTCCTGGGAGGTGCTGATAGCAATTTAAAGGGTGTCAAATAAATTGCCCCATGTAGCCTTCCTAGGTCCAACTCCAAATTCTAAACCCTAACTATAGAGGGTTTAAAGCTTTCGAGCCTCTTTCTTCATCAATTGAGAGCACAGAGAAATGGGTTCCGACAGCGAGACAGAGATGTCTGTGCTGAAAGAGAAGGAGAAGAGGAAGATGTTGGCGCTGGCTCCCATTGCTAAACCACTTGCGGGAAAGAAACTTTGCAAGCGAACCCTTAAACTTGTTCGTCGAGCTGCTGAGCACAAATGCTTAAAGAGAGGAGTAAAGGAGGTGGTTAAAAGCATAAGAAGAGGTCATAAAGGATTGTGTGTGATAGCTGGAAACATATCACCCATTGATGTCATCACTCATGTTCCTATCCTCTGTGAAGAGGCTGACGTTCCATATATATATGTTACATCTAAAGAAGACCTTGCAAGCGCAGGAGCAACCAAGAGGCCTACTTGCTGTGTTTTGGTACTGACAAAGCCTGCAAAGGGAGAAATAGAACAAGGGGAACAAGAGAAGCTAAAGTCAGATTATGATCAAGTTGTTTCTGAAGTTACTGAGGTTACAACATCACTTTTTTGAGACTAGCACACTTGTATCTGTACTGTTTACTCCAGTTGGACTAACATGTTGGTAGTGTACCTTTTTTTTTCAATCTTGCTTATCATTTTCTTATTTTAAAGTCTACCCACTGCTTTTATCAATCCTCTGAATTCATGTCTCTTGCGTGGGAAAGGCTGAAGCAATCTT 963 0.4258 MGSDSETEMSVLKEKEKRKMLALAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEEADVPYIYVTSKEDLASAGATKRPTCCVLVLTKPAKGEIEQGEQEKLKSDYDQVVSEVTEVTTSLF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02012 157 FunFam H/ACA ribonucleoprotein complex subunit NHP2 20 152 - -
Pste1g02012 157 PRINTS Ribosomal protein L7A/RS6 family signature 71 84 IPR018492 -
Pste1g02012 157 PRINTS Ribosomal protein L7A/RS6 family signature 52 66 IPR018492 -
Pste1g02012 157 PRINTS Ribosomal protein L7A/RS6 family signature 97 111 IPR018492 -
Pste1g02012 157 PRINTS Ribosomal protein L7A/RS6 family signature 87 97 IPR018492 -
Pste1g02012 157 PRINTS High mobility group-like nuclear protein signature 99 111 IPR002415 GO:0003723|GO:0005730
Pste1g02012 157 PRINTS High mobility group-like nuclear protein signature 55 65 IPR002415 GO:0003723|GO:0005730
Pste1g02012 157 PRINTS High mobility group-like nuclear protein signature 38 53 IPR002415 GO:0003723|GO:0005730
Pste1g02012 157 PRINTS High mobility group-like nuclear protein signature 25 38 IPR002415 GO:0003723|GO:0005730
Pste1g02012 157 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 40 123 IPR004038 -
Pste1g02012 157 SUPERFAMILY L30e-like 19 128 IPR029064 -
Pste1g02012 157 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 12 147 - -
Pste1g02012 157 Gene3D - 17 152 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02012 Pste-Chr1 6291784 6293745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02012 52 124 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 31.507 2.14e-06 44.3