LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g01994	ATGGCACTTTCCTTATGCCCATCTCTTCCTAACACTCTCACCTGTCGCTCTTCTTCTCAGTCTCACCATTTCTTTTTCCACCCTCCAAAATCCAACGTTAGGGTCCGTTGGGGCCCACAAGCGCGGCTAAAGAAGAAGGGAAGTTCCACAAAGCTTAGTGCGTTCAGCGAAGGAGTGAATGGGATTGGTAGTGTAGATGAAGATGGGTACCATGGGTCCATGGAGGATAAGCAATTCGTGCGTTCCTTTCGCGAGGCATGGCCGTACTTGTGGGCCTATCGCGGTAGCACTTTTGTTGTCATCATTTCCGGTGAAGTTGATATAGCTTTCCTTCATCACCTAGGAATCCGATTTGTTCTTGTTCCGGGGACACATGTGCAAATAGACAGGCTTTTGAATGAGAGAGGGTGCAAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGATGAGTCTCTAGAAGCTGCCATGGAGGCAGCTGGGGGAATACGGTTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGCCGGCACGGTGACAATAGTCGATGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTAGCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTACGAAGTTGCAACAGCTTGTGCCTTGGCTATTGGTGCAGACAAGCTAATATGTGTTATAGACGGTCCAATACTTGATGAGAGTGGACGCCTAATTCGTTTCCTGCCTCTAGAAGAAGCAGACATGTTAATTCGTAAAAGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAAGTTTCAACTCTCTTGATCATAACCATTTTAATGGAACAGTCAACTCACCATCGATTGGACGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAGAATGGAAATGGCTTTGGGTCTGCTGAGCAAGGTTTTGCTATTGGAGGTCAAGAACGGCTAAGTCGAATGAATGGTTACTTGTCAGAATTGGCTGCTGCAGCTTTTGTTTGCAGACGTGGCGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGGGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCTTCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGTTACAAACATTGGATTCGTTTGTTGTTGTGGAAAGAGAAGGTCATATAATTGCTTGTGCTGCCCTTTTCCCTCACTTTGAGGAGAAGTGCGGAGAGGTTGCTTGCATTGCAGTATCTCCCGATTGTCGTGGCCAAGGACAGGGGGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTTTTGGATTGCATATGCTTTTCCTGCTTACAACTCGCACAGCGGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTACATCCCTGAAAAGAAAAGGAGAGTGATAAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAAAGTGGAATTATTGTTGGTGTAAAATCTGCTGCAAGTTAGCACTACTTTATGTTGTTTTCCACCTACCAGGAAGTGAAGGGTGATTGCATGCAATATATTAGGCACTTCTATAGATAATAATCTCGCACAGTTTGATCTGTCAGGTCTTCCACGTGTAGCATTAAGCTTTTACATTTAATTTAATGTTAGTATTTAATTGTCACATTTTAAGTCC	1963	0.433	MALSLCPSLPNTLTCRSSSQSHHFFFHPPKSNVRVRWGPQARLKKKGSSTKLSAFSEGVNGIGSVDEDGYHGSMEDKQFVRSFREAWPYLWAYRGSTFVVIISGEVDIAFLHHLGIRFVLVPGTHVQIDRLLNERGCKPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVARMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDGPILDESGRLIRFLPLEEADMLIRKRAEQSEAAANYVKAVDEESFNSLDHNHFNGTVNSPSIGRFTEWHNATFHNGVGFENGNGFGSAEQGFAIGGQERLSRMNGYLSELAAAAFVCRRGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDEELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASSFGLHMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRVINLSRNSKYYMKKLLPNKSGIIVGVKSAAS	595

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g01994	595	Pfam	Amino acid kinase family	108	299	IPR001048	-
	Pste1g01994	595	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	436	582	IPR016181	-
	Pste1g01994	595	Gene3D	-	77	432	IPR036393	-
	Pste1g01994	595	Hamap	Amino-acid acetyltransferase [argA].	74	579	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Pste1g01994	595	Gene3D	-	433	579	-	-
	Pste1g01994	595	NCBIfam	amino-acid N-acetyltransferase	387	579	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Pste1g01994	595	SUPERFAMILY	Carbamate kinase-like	381	429	IPR036393	-
	Pste1g01994	595	CDD	AAK_NAGS-ABP	78	427	IPR033719	-
	Pste1g01994	595	PANTHER	AMINO-ACID ACETYLTRANSFERASE	57	586	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Pste1g01994	595	SUPERFAMILY	Carbamate kinase-like	77	303	IPR036393	-
	Pste1g01994	595	Pfam	Acetyltransferase (GNAT) family	470	538	IPR000182	GO:0016747
	Pste1g01994	595	CDD	NAT_SF	474	536	-	-
	Pste1g01994	595	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	433	581	IPR000182	GO:0016747

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g01994	Pste-Chr1	6240968	6250777	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Pste1g01994		AA_kinase	2.2e-09	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste1g01994	1	6240968	6250777	Pste7g00903	7	8350139	8360659	PCT