Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01906 ATGCTTTCTGCTATTCCCGCTTTCGACCATTTTCAGGGGAACCCATTCACGGGGTTAGACTACGGTTTCACCCCGTGGGATGGGCCTGGGTCTGATTCTTTGGGCTTCAATTCCAGCAGCCCAAACCCCGTCACTTCGAGCTCCGGCTCGGACGACCCCAACCCAACCCATGCAGCGGCCTCTCACGAGTCCAACGATGTTGCGTTGTTCTTCATGGAGGAGCGAAAACGTAGGAGAATGAAATCCAACAGGGAATCGGCCAGAAGGTCCCGCATGCGTAAACAGAGACACCTAGACAACCTACGGAACCAGGTGAACCAGTTTAGGGTTGAAAACCAGGAACTGGGAAACGGGTTGCAGTTCCTCCATCACCACTTTAACCGCCTACAAACCCAAAATGAGTCGCTCCGCTCCCAGCGAACCCTGCTCCGCCAAAAACTGGCCTACATAAATCAATTTTTGCTTTTCCAACAATTGCAACCATTTTCCACTGCATGCCCCTGCAATATTGTCATCACGGAATAA 525 0.5181 MLSAIPAFDHFQGNPFTGLDYGFTPWDGPGSDSLGFNSSSPNPVTSSSGSDDPNPTHAAASHESNDVALFFMEERKRRRMKSNRESARRSRMRKQRHLDNLRNQVNQFRVENQELGNGLQFLHHHFNRLQTQNESLRSQRTLLRQKLAYINQFLLFQQLQPFSTACPCNIVITE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01906 174 Coils Coil 84 118 - -
Pste1g01906 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Pste1g01906 174 MobiDBLite consensus disorder prediction 32 65 - -
Pste1g01906 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Pste1g01906 174 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Pste1g01906 174 MobiDBLite consensus disorder prediction 32 61 - -
Pste1g01906 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Pste1g01906 174 FunFam BZIP transcription factor 73 124 - -
Pste1g01906 174 MobiDBLite consensus disorder prediction 75 94 - -
Pste1g01906 174 SUPERFAMILY Leucine zipper domain 75 127 IPR046347 GO:0003700|GO:0006355
Pste1g01906 174 Pfam bZIP transcription factor 75 133 IPR004827 GO:0003700|GO:0006355
Pste1g01906 174 Coils Coil 126 146 - -
Pste1g01906 174 Gene3D - 73 126 - -
Pste1g01906 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 38 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01906 Pste-Chr1 5918298 5918822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01906 1 160 bZIP Transcription Factor Family AT2G22850 31.776 9.11e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste1g01906 bZIP_1 1.2e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01906 1 5918298 5918822 Pste7g00864 7 8028658 8029167 PCT