Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01903 ATGCATCGCTCTTCTTCTCTTCCGACGAGATCCTTGTCTTCCTCCAGCCCAGAAATCCCCAGCCTTTACTCCTTCCTGCAGCCCAGTGTGTTTGCGGTGACAAAAAACAAGCAGCAACCCATTTCAGAAGGGTCCCCAAAGGCACCAACTTGCCTCTCCCCCACCCAACTCTCCACTCTTGAAACCACCCTCCACAAGTCCCTCATCTGCAGCAACACTGATGAGGCATGGAAGTCCTTCAAGACCCTCACTTCCCACCACTCCTTCCCTCCCAAACCCCTCACCAACTCCCTCCTCACCCACCTCTCCTCCCTTGGTGACACCCTCAACCTCAAGAGGGCCTTTGCCTCTGCTGTCTTCCTCATGGAGAAGAACCCCTTTCTCATTCACCATCACACCATACACCACATTCTTCTCTCCATGAGTGCTGCCAACACTTCTGCCCCTGCCTTTGCCCTTGTCAGGTGCATGTTCCGGAACAGGTTCTTTGTTCCCTTTTCTGTGTGGGGCCCTCTTCTTGTTCAGATCAGTCGGAACAATGCTAACCTTGCTGCTTTTTTAAGGGTCTTTGAGGAGACTTGTAGGCTGGCTCTTGAGGAGAGGATTGAGTTCATGACACCTGATCTTGGTGCTTGCAATGCAGCTCTTGAAGGTTGCTGCTGTGAGCTTGAGTCTGTCAGTGATGCTGAGAGGGTTGTTGGGATAATGTCAAGTTTAGGGATTAGGCCTGATGAGTTCAGTTTTGGGTTTCTTGGGTATTTGTATGCACTCAAGGGGTTGGAAGATAAGATAAGTGAGTTGGAAGTTTTGATGGGTAGGTTTGGTTGTTTTAACAAGAAGGGTTTCTACTGTAATTTGATCAGTGGGTATGTTAAGTCTGGGAATTTGGCTTCTGTGGAGAGAACTATTGTTAAATGTCTGAACGATGGAGGTGGCAAGGATTGGTGTTTTGGTCTTGACACTTTCTGTGAAGTCGTTAAGGCTTATTTTCAGAAGGGAAATATCAAGGGGTTAGCTAATATGATTATTGAAGCTCAGAAGTTAGAGGGTTCAAATATTGTTGTTGATAAGTCTATAGGGTATGGTATTGTTAATGCTTGTATTAGTATTGAGCTATCTGATAAAGCACACAGCATTCTTGACGAGATGAATGCTCTGGGGGCCTCTGTGGGTCTTGGAGTCTATGTACCTATCTTGAAGGCTTACTGCAAAGAAAATAGAACTGCTGAGGCTACTCAGTTGGTGATGGAGATTAGTAATTCAGGTCTTCAGTTGGATGTGGGAACCTACGATGCTTTGATAGAAGCATCCATGTGCAGCCAAGATTTTCAGTCAGCTTTTTCCCTGTTTAGGGATATGAGAGAGGCAAGAATTCCTGACTTGAAAGGGAGTTACTTAACTATAATGACAGGTTTGATGGAGAATCATCGGCCTGAGTTGATGGCGGCATTTTTAGATGAGGTGGTTGAGGATCCTAGAGTTGAGGTAGGCACTCATGATTGGAATTCTATCATCCATGCTTTCTGTAAAGCTGGGAGACTAGAAGATGCAAGAAGGACTTTCAGAAGGATGATGTTCCTGCAGTTTGAGCCAAACGATCAGACATACTTGTCCATAATTAATGGATATGTCTTGGCAAAAAAATATTTTCTTGTGCTGATGTTGTGGAATGAGGTTAAGCGAAAGCTATCTGTGGATGGGCAGAAGGGGATCAAGTTTGACCACAATTTGGTTGATGCATTCCTATATGCTATGGTTAAGGGAGGTTTCTTTGATGCTGTCATGCAAGTTGTGGAGAAAGCTAATGGGATGAAAATATTTGTGGATAAGTGGAGATACAAGCAAGCATTCATGGAGACCCATAAAAAGCTCAAAGTTGCAAAGTTAAGAAAAAGAAATTTTAGAAAAATGGAGGCGCTTATTGCTTTCAAGAACTGGGCTGGTTTAAACACATGA 1956 0.4453 MHRSSSLPTRSLSSSSPEIPSLYSFLQPSVFAVTKNKQQPISEGSPKAPTCLSPTQLSTLETTLHKSLICSNTDEAWKSFKTLTSHHSFPPKPLTNSLLTHLSSLGDTLNLKRAFASAVFLMEKNPFLIHHHTIHHILLSMSAANTSAPAFALVRCMFRNRFFVPFSVWGPLLVQISRNNANLAAFLRVFEETCRLALEERIEFMTPDLGACNAALEGCCCELESVSDAERVVGIMSSLGIRPDEFSFGFLGYLYALKGLEDKISELEVLMGRFGCFNKKGFYCNLISGYVKSGNLASVERTIVKCLNDGGGKDWCFGLDTFCEVVKAYFQKGNIKGLANMIIEAQKLEGSNIVVDKSIGYGIVNACISIELSDKAHSILDEMNALGASVGLGVYVPILKAYCKENRTAEATQLVMEISNSGLQLDVGTYDALIEASMCSQDFQSAFSLFRDMREARIPDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRVEVGTHDWNSIIHAFCKAGRLEDARRTFRRMMFLQFEPNDQTYLSIINGYVLAKKYFLVLMLWNEVKRKLSVDGQKGIKFDHNLVDAFLYAMVKGGFFDAVMQVVEKANGMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNT 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01903 651 PANTHER BNAC05G43320D PROTEIN 9 650 - -
Pste1g01903 651 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 208 243 IPR002885 -
Pste1g01903 651 Gene3D Tetratricopeptide repeat domain 57 349 IPR011990 GO:0005515
Pste1g01903 651 Gene3D Tetratricopeptide repeat domain 460 613 IPR011990 GO:0005515
Pste1g01903 651 Gene3D Tetratricopeptide repeat domain 387 459 IPR011990 GO:0005515
Pste1g01903 651 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 497 531 IPR002885 -
Pste1g01903 651 Pfam Pentatricopeptide repeat domain 414 458 IPR002885 -
Pste1g01903 651 Pfam PPR repeat family 501 543 IPR002885 -
Pste1g01903 651 NCBIfam pentatricopeptide repeat 501 532 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01903 Pste-Chr1 5901041 5903251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01903 244 562 Miscellaneous Gene Families AT4G11690 24.695 3.33e-15 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01903 1 5901041 5903251 Pste1g01903 1 5901041 5903251 ECH