Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01901 AAATACAACCCTTTCCTTTACTTCATTCACCATATGCCCAAATCAATTTAAACTTCAAAACTTGTTCTGCCTCCTCCCATTATATATTCTACTTCCACCATTTCCATGCACGATAGATAAAAGAGTTATTGCTCTTTGCCACATCAGGCACCTTCCTTCTCAATCACTATTTAAGAAACAATGGAAATTGGCAATAGTTGGGAGCAGAAAGCACTGGTGAGTGAGCTAACTCAAGGGATGGAGATAGCCAGAAAGTTGAAGGAAGACATGAGTTTACCCTCTTCGGTTAACTCTAGGGACTCATTGTTGCAGAGGATATTATCCTCTTATGACAAGGCTTTACTTATTCTGAGATGGAATGAATCAATGTCCAATTCACTAACCATGAATCAAGAAACTAATACTTCCTCACCACACTTTCCTATATTAGTTGACAAAAGTCCTTTGGGCGAGGATGCTGGAGGTGTTCACAATTCAAAGAAAAGAAAGATGATGCCCAAATGGACAGAAAGGGTTAGAGTGAAGATCAAGAATGGCGTTGAAGTGCCCCTGGAAGATGGTCACAACTGGAGAAAATATGGTCAGAAAGACATCCTCAGTGCCAAATATCCCAGAAGCTATTATAGATGCACCTTTCGCAAAAGAAAGGGGTGCTTGGCGACAAAGCACGTGCAGAGATCAGAAGAAGACCCTACGATGTTAGACATAACATACCGAGGAAGCCACACGTGTAAGGAAAACGACGGTGTTGTGGCTCCAAAATCAGCAGATAATGATGAGAAAATTCATAGTAACAACATTGAGTTTGAGCATGCACAAATTTTGAGTGCGAAAACGGATAACATAACAGCACATCCATTCGGTGCTTCCTCTTCGACTTCGTTTGGATGCATGACACAAGACGACAACTATCACGCCTTACTTCCTTCTTTGGTCCTAAACAATGATCCTTGTTTGGCCACCCTTTCCCAAACATCCTTATTGTCTCCAAACACACCTCAATCAGTGTCTCCATCTTTCCTCTTACATGAATTCGATGGATTCTGTAACAAGCCTTGCCCTGAATCTCATTTTGCTGAGATCGTTTCATCAACCACCAATTCTCCAATTTTTGACTTCAGTTTCTCACTCGATGCAGTGGGAATTGATGAAAGTTTCCCCTTTAATGCCTCTGGGTTTTATCCTGAGTGCACTTCAGAATGATTTTCGTACTATTTGCTATTTGTAGAAAGTATCAATGGTTACCATTTTACATAGGGTCGTGGAATCATGTATTACACTCTAGCCAGCACTAATATATGCCTTAGTTTGTTCTTTCTAAAATAACCTAGTTGATTTCTAGACAACGTTATTTATTTAAAAACTGATGCGGTAATTTAAAAACAAATATAAATATTGTTGATTTTTACAATAACAATATAACATTTTAAGAGTTATAATAATAATCATTGAGATTAATTTACAGTATAAGATTG 1475 0.3844 MEIGNSWEQKALVSELTQGMEIARKLKEDMSLPSSVNSRDSLLQRILSSYDKALLILRWNESMSNSLTMNQETNTSSPHFPILVDKSPLGEDAGGVHNSKKRKMMPKWTERVRVKIKNGVEVPLEDGHNWRKYGQKDILSAKYPRSYYRCTFRKRKGCLATKHVQRSEEDPTMLDITYRGSHTCKENDGVVAPKSADNDEKIHSNNIEFEHAQILSAKTDNITAHPFGASSSTSFGCMTQDDNYHALLPSLVLNNDPCLATLSQTSLLSPNTPQSVSPSFLLHEFDGFCNKPCPESHFAEIVSSTTNSPIFDFSFSLDAVGIDESFPFNASGFYPECTSE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01901 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 197 IPR044810 GO:0003700
Pste1g01901 340 ProSiteProfiles WRKY domain profile. 119 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01901 340 FunFam WRKY transcription factor 53 110 187 - -
Pste1g01901 340 Gene3D WRKY domain 109 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g01901 340 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01901 340 Pfam WRKY DNA -binding domain 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01901 340 SUPERFAMILY WRKY DNA-binding domain 123 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01901 Pste-Chr1 5895806 5897599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01901 6 186 WRKY Transcription Factor Family AT4G23810 42.453 8.29e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste1g01901 WRKY 7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01901 1 5895806 5897599 Pste1g01901 1 5895806 5897599 ECH
Pste1g01901 1 5895806 5897599 Pste6g01840 6 8444922 8448444 ECH
Pste1g01901 1 5895806 5897599 Pste3g00850 3 5298087 5300893 PCT