Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01897 CCCAAAAATAAGGCAGAGATGTCCACAACCGCAACTACAACCTCTGGAGAAGTGAGCAGCAAAGAGTGGAAACAGATAAAGATGAGCGAACAAGAGGAGGATCTGATTCGCAGGATGTACAAGCTAGTCGGGAACAAGTGGAATTTGATAGCGGGTCGCATTCCAGGTCGCAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGCTCATGCTTACTCTCATACAAGAAGCGGAAAGTAA 246 0.4553 PKNKAEMSTTATTTSGEVSSKEWKQIKMSEQEEDLIRRMYKLVGNKWNLIAGRIPGRKAEEIERFWIMRHAHAYSHTRSGK 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01897 81 FunFam MYB-like transcription factor 27 69 - -
Pste1g01897 81 Pfam Myb-like DNA-binding domain 27 67 IPR001005 -
Pste1g01897 81 SMART sant 24 72 IPR001005 -
Pste1g01897 81 MobiDBLite consensus disorder prediction 1 22 - -
Pste1g01897 81 Gene3D - 27 80 - -
Pste1g01897 81 SUPERFAMILY Homeodomain-like 28 67 IPR009057 -
Pste1g01897 81 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 22 69 - -
Pste1g01897 81 MobiDBLite consensus disorder prediction 1 23 - -
Pste1g01897 81 CDD SANT 27 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01897 Pste-Chr1 5879809 5885429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01897 24 66 MYB Transcription Factor Family AT5G52600 58.140 2.43e-13 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste1g01897 Myb_DNA-binding 1.7e-07 CL0123