Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01860 ATGGCATCGCAAATGGCGATCCTCTTCCGCACTCGGTCCCTCTTCCCCAAACCCCAAACCCTCTTCAAAAGCATAACAACATTCCCCTCCCTCTCCCAAGAGCCCCAGCTACCCAATCCCCAACCCTCCGGCGGCGCCACCTCCCTTGCCCCCCTGGGCGTGTACAACCGCGCCACCTCCGACACCTTCGACCACCGCGCTCTCCTGGACCACTTCGGCGACCAGATGGCCTCCCAGCGCTGGGACCAAGTCAAGAACCTCTTCGAATCCTGGCTTCGTTCCCTCGACAAATCTGGTAAACCTAACAAACCCGACGTTAACCTCTTCAACCACTACCTCCGCGCCAATCTCATGCTCGGCGCCTCCGCCTCCGACCTCCTCCACCTCGTTTCCCAGATGGACACTTTCAATCTCTCTCCCAACACCGCCTCCTTCAACCTCGTTCTCAAGGCCATGTGCCAGGCCAACGAAACCCTCGCCGCCGATCAATTGCTCCAACGGATGCTGCAGGCAGGAAATGATGCACTCCCGGATGATGAATCATATGACTTAGTCATGGGAATGCTCTTTTCCAATGATCAGATTGATACTGCATTCAAATATATAGATTTAATTTTGAAATCTGGTAATGTGTTGTCAACAACTGTTTTTACAAACTGTGTGAGGAGTTGTGTCAGTAAGGGAAGGCTTGATACATTGGTGACAATAATTGAAAGGTGCAAGGCATCAGATCAAAACAAAGCTCTTTGCCCCGAGTGGGGTCTATGCACTTTTATTGTTGAAATTGCAACTCGAGAGGATAATAGCAAATTAGCTTTTTATGGCCTGGAGTTTATGGCTAGATGGATTGTGAGGGGTGAACGTCAAAGACCTCCTATGCTTCTTTCTGTAGACGAAGGTTTAGTTCTGTCAGCTCTTTTGACTGCTGCTACAACCTATAATTCTGAGCTGCTTGGGGCATCATGGGCTGTTTTGGTCCGTTCATTGCGTAAAAAGAAAGCTCCTAATCCAGAGTCATATCTTGCAAAGATATATGCCCTTTCATCATTGGGGCATTTACAAAAGGCTTTTGCTACTCTAAATGAATATGAGTCAGCTTATGGAGATTCCAGTCAAGAAGCTGAAGAATTGTTCTGTCCATTTACTTCGTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACTCTAGACAATGTTTATTTTCAACTGGAGAGTTTAAACCGTGCAGAGCGTCCTTATAAATCTGTTGCTGCACTAAACTGTATCATTTTAGGATGTGCAAACATATGGGACCTTGATCGAGCTTACCAAACTTTTGAATCAATTGGATCTAGTTTTGGGTTGAACCCTGACATTCATTCATACAATGGGCTGATGTATGCCTTTGGAAAGCTCAAGAAGACTCTTGAAGCTTCAAGGGTGTTTGAGCACCTAGTGAGTTTGGGTCTCAAGCCTAATGCAAAATCATATTATCTGCTTGTTGATGCCCACCTGATTAATCGGGATGTCAAATCTGCCCTGGCAGTTATTGATGATATGAGAGCGGCTGGATTTGAACCATCAAAAGAGTTGCTAAAAAAAGTCAGACGAAGATGCATACGAGAAATGGACTACGAAAGTGATGACAGAGTGGAATCAGTAGCTAGATCCTTGGATTATCGATTGGGTTCAGAAGCCCGGCGGGACATTCTGTTTAATCTTCAATATAGTATGGATTATGCTTGAAAGGTTCAATATGATTGATGTCCAAATGAATTATTTGAACCATTTGGCATATCCTTTTTTGCATCCATTTCCAAGGGAATCCCTCTATGTATATTAGTGGATGCTGCTCAGGTTGCGGGGTCAGCGGATGATACAAGAATAGCTTGGAGCAATCTTTATTTTTGTATTTATGTGTTTATCAAGCGGGGAGGGTGTTGAAGATGGAATTAGCTGTCTTAGTGAAATCCCAAAGCAGTTAATTTTCCAGCAAATTTATTCAAAATAATTGTGTAGGACTGATCCTAGAGGATAGAATCGAGGTCGACAATTCTGTCAAGGTTCCTATTTTTTTGTTCTGCCTTTGTGGCACTGCCTATTTTTAACAACCTAGTGTGGCAAGTTGGCAATCACTAGAAGTTGCAAGGATTTGGAAACTGCTTTTGTGGTGCTGTGGTTGTATACTGCAAATAATGGTTACTTTTTCAATCAAGCCCAGGTTTTGATACCTTCTCTAAAATAAC 2234 0.4427 MASQMAILFRTRSLFPKPQTLFKSITTFPSLSQEPQLPNPQPSGGATSLAPLGVYNRATSDTFDHRALLDHFGDQMASQRWDQVKNLFESWLRSLDKSGKPNKPDVNLFNHYLRANLMLGASASDLLHLVSQMDTFNLSPNTASFNLVLKAMCQANETLAADQLLQRMLQAGNDALPDDESYDLVMGMLFSNDQIDTAFKYIDLILKSGNVLSTTVFTNCVRSCVSKGRLDTLVTIIERCKASDQNKALCPEWGLCTFIVEIATREDNSKLAFYGLEFMARWIVRGERQRPPMLLSVDEGLVLSALLTAATTYNSELLGASWAVLVRSLRKKKAPNPESYLAKIYALSSLGHLQKAFATLNEYESAYGDSSQEAEELFCPFTSLHPLVVACSKKGFETLDNVYFQLESLNRAERPYKSVAALNCIILGCANIWDLDRAYQTFESIGSSFGLNPDIHSYNGLMYAFGKLKKTLEASRVFEHLVSLGLKPNAKSYYLLVDAHLINRDVKSALAVIDDMRAAGFEPSKELLKKVRRRCIREMDYESDDRVESVARSLDYRLGSEARRDILFNLQYSMDYA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01860 577 MobiDBLite consensus disorder prediction 31 46 - -
Pste1g01860 577 NCBIfam pentatricopeptide repeat 492 524 IPR002885 -
Pste1g01860 577 NCBIfam pentatricopeptide repeat 456 490 IPR002885 -
Pste1g01860 577 Pfam PPR repeat 144 172 IPR002885 -
Pste1g01860 577 Pfam Pentatricopeptide repeat domain 476 524 IPR002885 -
Pste1g01860 577 Gene3D Tetratricopeptide repeat domain 300 557 IPR011990 GO:0005515
Pste1g01860 577 PANTHER OS07G0599000 PROTEIN 57 576 IPR044605 -
Pste1g01860 577 Gene3D Tetratricopeptide repeat domain 75 272 IPR011990 GO:0005515
Pste1g01860 577 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 141 175 IPR002885 -
Pste1g01860 577 MobiDBLite consensus disorder prediction 31 51 - -
Pste1g01860 577 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Pste1g01860 577 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 454 488 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01860 318 524 Glycosyltransferase AT1G05670 24.880 7.29e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01860 1 5735563 5740928 Pste1g01860 1 5735563 5740928 ECH