Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01856 CAACGTATTACTTGAGTTTTGCTCTGATTGACTCCCTCCAAATAAAATCAGCGCCTCCCCATTCCCAGTTCCCAATTCCCAATTCCCAATTCCCATTCATCTCGATTCTCTCACACAACTAACTTCAATTCCATTTTCTCACTGATTCTCCTTCTATGCAGGGCATAACACAGTATAATAAACAAGGGAAAAGAACCAAAATCTACCTTTCTAATCATGATTGCCAAAGCAGCAGTACTTTTTCTCCTTCTGTAAGACTTCGAGGATGGCAACAAAGTCAAAAAAGGCAAGTGCCGACTTGGATTTCTGCCCTCTTCCATTCACACGTTAGAGGTTGCTTTACGAATGTTTTTCTGCCAGAAGCTCCTCTTTGTCTTCAAATTGCCGGTCTTCTCAGGAACAAAGGTTTTGGAATTCAATTTCACATCATATGACATGATTTTGTGCTATAATGGTGGTATCCAACAATAGACTCTGCTGAATTTCCTGCCAGAGAAAGCGATTTAGATCGGATAATCCCAAAAATGAAAAAAGTAGTCTCTCTCATCTCTTTCCAATGCAATTTTTTCCTTCTCATCAAGTTCCTACTTCTATCAGAGACTGTAATGGCAGAACCAAGGGCCAAGACAGTCCAAGTAACATGTGGCCATGTACTAGAGCACAACACTACCATCTTTGTTCCAAACTTTGTTGCAACTATGGAGAAGATCAGTGATCAGATGCGCAAAACTGGCTTTGGCACAGCAGTTGTAGGGACAGGACCTGATACCAACTATGGCCTGGCACAGTGTTATGGAGATCTTTCACTGCTTGACTGTGTATTATGTTATGCTGAGGCACGCACGGTTCTTCCTCAGTGCTTTCCTTATAATTCTGGTCGCATTTTCCTTGATGGTTGCTTCATGAGGGCTGAGAATTATAGCTTCTTTAATGAGTATACGGGACCAGGAGACAGAGCTGTGTGTGGAAACACTACCAAGAAGAATTCAAGTTTTCAAGATGCAGCAAGGCACGCAGTTTTAAAAGCTGTTCAAGATGCACCTAACAACAAAGGATATGCTAAAGCGAATATTGCTGTGGCAGGAACAACTAACCAATCTGTTTATGTTCTGGCTGATTGTTGGAGAACATTGGACAAAAGTTCTTGCAACACATGTCTTGAGAATGCATCTTCTTCCATATTGGGATGCTTGCCCTGGTCAGAAGGACGAGCGCTCAACACGGGGTGCTTCATGAGGTACTCAGACACAGATTTTCTTAACAAGGAACAAGAAAATGAGAGTTCAAGAGGTAATGTAGTAGTGATAGTGGTTGCAGTAATCAGTTCGGTGATTGTATCAGTGGTTGGAGTAATTATTGGAGTTTATATATGGAAACAAAGATACATTCAAAAGAAACGAAGAGGTTCAAATGATGCAGAAAAGTTGGCAAAAACACTTCAGAACAATAACTTGAACTTCAAGTACTCTACATTGGACAAGGCTACTGGATCTTTTCATGAAAATAACAAGTTGGGGCAAGGAGGATTTGGAACAGTTTACAAAGGAGTTCTAGCTGATGGAAGAGAGATTGCTATAAAGAGATTATATTTCAATAACAGACATAGAGCAGCAGATTTCTATAACGAAGTCCGCATAATTAGTAGTGTGGAACATAAGAATCTGGTCAGACTGTTAGGTTGCAGTTGTTCAGGACCTGAGAGCCTGCTTGTATATGAATTTCTACCTAACAAAAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAAAGAATTGAACTGGGAAAAGAGATATGAAATTATCATCGGAACAGCCGAAGGATTAGTTTACCTGCATGAGAACTCCAAAATAAAGATAATTCACAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAGGCTTCGTGCTAAAATTGCAGATTTTGGTTTGGCCAGGACCTTTCAAGAGGACCAGAGCCACATAACTACAGCTATTGCAGGAACCTTGGGGTATATGGCTCCTGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGACGTATATAGTTTTGGAGTGTTGCTGCTAGAGATAGTCACTGGTAGACAGAACAACAGGAGCAAAGCATCAGAATATTCAGACAGTATAGTTACAGTGGCATGGAAGCATTTTCAGGAAGGAAGTGCTGAGCAATTATTTGATCCAAATCTAGAGTTGCAGGAAGACCACAACGGCAATGTTAAGGATGAGATTTTAAGAGCGGTTCACATAGGACTTCTGTGCACCCAAGAGGTCCCTTCTTTAAGACCAATCATGTCAAAGGCACTACAAATGCTAACAAAAAAAGAGGAGGAACTTGTTGCTCCCTCTAATCCACCCTTCCTAGATGAGAGTACCATGGAACTTCATGACACAAGTGCAGACCCATTTTATCCTATTAATGCAGCTGATTCAATTGCTACTGTGTCCCATAGCTCTTTTTATCCCAGGTAACCATGAGAATGCAGAGGAAATCCCTACACACAGATGCCTTCAGCACAGCTTGTGATTGGCAAATAACTTGGTCTGCCTCAGAAGTCAGACCTATGCACTTAAGGTTGCTAACTATGCATCCAGTCCTTTGCCATTTAAAATACATACTTCAGACAAGGGAAGCTTTTAAGCCAAATGTCCAATACAATTATGGGAAGCAAAAAATAGTGTATAGTTCCATGATTAACAGTATTATACAATTTCAGATTAATCTGATATATGTAACAGCCCATAAATACTACTTTTGGATACGACTATTATTTCATTTGTGAAACAATAATTTCCATGAGGAAAACATAAAGCAAAGATAG 2827 0.4018 MKKVVSLISFQCNFFLLIKFLLLSETVMAEPRAKTVQVTCGHVLEHNTTIFVPNFVATMEKISDQMRKTGFGTAVVGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNSGRIFLDGCFMRAENYSFFNEYTGPGDRAVCGNTTKKNSSFQDAARHAVLKAVQDAPNNKGYAKANIAVAGTTNQSVYVLADCWRTLDKSSCNTCLENASSSILGCLPWSEGRALNTGCFMRYSDTDFLNKEQENESSRGNVVVIVVAVISSVIVSVVGVIIGVYIWKQRYIQKKRRGSNDAEKLAKTLQNNNLNFKYSTLDKATGSFHENNKLGQGGFGTVYKGVLADGREIAIKRLYFNNRHRAADFYNEVRIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDKNKGKELNWEKRYEIIIGTAEGLVYLHENSKIKIIHRDIKASNILLDARLRAKIADFGLARTFQEDQSHITTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKASEYSDSIVTVAWKHFQEGSAEQLFDPNLELQEDHNGNVKDEILRAVHIGLLCTQEVPSLRPIMSKALQMLTKKEEELVAPSNPPFLDESTMELHDTSADPFYPINAADSIATVSHSSFYPR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01856 650 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
Pste1g01856 650 Gene3D - 35 134 IPR038408 -
Pste1g01856 650 Gene3D - 144 244 IPR038408 -
Pste1g01856 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Pste1g01856 650 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Pste1g01856 650 SUPERFAMILY Protein kinase-like (PK-like) 308 627 IPR011009 -
Pste1g01856 650 Gene3D Transferase(Phosphotransferase) domain 1 400 611 - -
Pste1g01856 650 FunFam Putative DUF26-domain receptor-like protein kinase family protein 292 399 - -
Pste1g01856 650 CDD STKc_IRAK 330 601 - -
Pste1g01856 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 623 - -
Pste1g01856 650 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Pste1g01856 650 Pfam Protein kinase domain 324 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01856 650 ProSiteProfiles Protein kinase domain profile. 324 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01856 650 FunFam Cysteine-rich receptor-like protein kinase 2 400 607 - -
Pste1g01856 650 SMART serkin_6 324 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01856 650 FunFam Cysteine-rich receptor-like protein kinase 2 33 134 - -
Pste1g01856 650 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Pste1g01856 650 Pfam Salt stress response/antifungal 51 132 IPR002902 -
Pste1g01856 650 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Pste1g01856 650 FunFam Cysteine-rich receptor-like protein kinase 3 143 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01856 Pste-Chr1 5720880 5727879 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01856 17 650 Receptor kinase-like Gene Family AT1G70520 68.446 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g01856 Pkinase 4.3e-47 CL0016