Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01853 TGGAGAGACAGTGATAGAGGAAATGGCATTCTCGTAGTTACGGCCCCACTAAGAACACCCGAGAGCACTACGGTGAGCTTGAAGGTAGTTGTATTAGTAGGAGTGTTAGTAGTGTTGACGGTGGTGATTGTGGTTCTGATATTGTTCCTATGCTTCCGAGGGAGCCGGAGCTTCAAGAGGCGAAACCTGGCGGCGAAACACAGCTCGGGGAGCATCCCTCTGGTGTCGAAGGAGATAAGCATGGTTAAGGCGTCGGATCTCAACCCCACCACCGAAGAAGTCCACTGTGATCCCAAGAAGGAGGCGGAGATCAAGGTCGAAATTGGAGGCGGGGCCCACTGCAGCACCCAAGTGTCGGTGGAGGATCCCGATATTGGGTGGGGCCGCTGGTACACAATTAGGGAGGTGGAACTCGCCACGCGCGGCTTCGCCCAAGGGAATGTTATTGGGGAAGGAGGGTATGGTGTCGTCTACAGAGGACTTCTCCACGATGCCTCCCTCGTAGCTGTCAAGAATCTTCTCAACAACAAGGGTCAAGCCGAAAAAGAGTTTAAGGTGGAGGTAGAAGCCATTGGAAAAGTAAGACATAAGAATTTGGTTCGTTTGGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAGTATGTTGACAACGGAAATTTGGAGCAGTGGCTGCATGGTGATGTAGGATCAATTAGCCCCTTGACATGGGATATTCGAATGAAGATTGCTATTGGGACCGCAAAAGGGCTAGCCTATTTGCATGAAGGTTTAGAACCCAAAGTTGTGCACCGGGATATAAAATCCAGTAACATTCTTTTGGATAAAAACTGGAATGCCAAAGTATCAGATTTTGGACTAGCCAAACTCTTGGGATCAGAGAAAACACATGTGACTACACGTGTAATGGGAACATTTGGATATGTTGCACCTGAGTATGCAAGCTCGGGAATGCTTAATGAGCGCAGTGATGTGTATAGCTTTGGAGTTCTTCTCATGGAGATAATCACAGGAAGAAGCCCCATTGATTATTCAAGACCGCCTGGAGAGATGAATTTGGTAGATTGGTTTAAGGCAATGGTAGCAAGTCGTCGTAACTTGGATGTCATTAAGAGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGACTGATGATTTCCCCTTTCGTTCAGAGCTGCGTACAGTTAGAGAGAAAAATCCTGGGTCTTCTCATGCCGATGTTTCCATTAAGGTTCCTTATCCACCACCAAAGCATGCAGAAACCATAGAAAAATCAAGATGGAGATAATTAATTATTTGTATGGTCATGCAACTTTGGTGATCAATTTATTTGCATTACGATTTTCATGATGCTGTGAACGAGTATGTGTGCATATCTTATACGGTGTAGTAATTTCCTTCAGGTTTCAACACCATTTTGTTGTACTGTATTCCATTACTTGGGAACTCAGAAGAGCATGGCTTGTAAATACGTACCTCACTATCTGTCAATTTTGTTTGTCTGCTTGTGGACCCATTCAAGAAACGTAGAGCATGTTTGTATTCATGTAGGATGATTTAAGATCGGACTCAAGTATTATGATTTTAGGTTTGTTCTTGTATTGAAG 1618 0.4468 WRDSDRGNGILVVTAPLRTPESTTVSLKVVVLVGVLVVLTVVIVVLILFLCFRGSRSFKRRNLAAKHSSGSIPLVSKEISMVKASDLNPTTEEVHCDPKKEAEIKVEIGGGAHCSTQVSVEDPDIGWGRWYTIREVELATRGFAQGNVIGEGGYGVVYRGLLHDASLVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVGSISPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVAPEYASSGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKAMVASRRNLDVIKRPKMGQIVHMLETDDFPFRSELRTVREKNPGSSHADVSIKVPYPPPKHAETIEKSRWR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01853 432 FunFam Putative receptor-like serine/threonine-protein kinase 219 375 - -
Pste1g01853 432 PANTHER OS01G0323000 PROTEIN 22 373 - -
Pste1g01853 432 SMART serkin_6 143 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01853 432 FunFam Probable serine/threonine-protein kinase At1g01540 123 218 - -
Pste1g01853 432 Pfam Protein kinase domain 145 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01853 432 ProSiteProfiles Protein kinase domain profile. 143 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01853 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pste1g01853 432 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Pste1g01853 432 Gene3D Phosphorylase Kinase; domain 1 115 218 - -
Pste1g01853 432 SUPERFAMILY Protein kinase-like (PK-like) 125 387 IPR011009 -
Pste1g01853 432 MobiDBLite consensus disorder prediction 401 432 - -
Pste1g01853 432 CDD STKc_IRAK 149 386 - -
Pste1g01853 432 Gene3D Transferase(Phosphotransferase) domain 1 219 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01853 Pste-Chr1 5714980 5718703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01853 16 379 Trihelix Transcription Factor Family AT1G68690 41.379 1.05e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pste1g01853 Pkinase 2.5e-46 CL0016