Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01851 AGACACGGAGGTAGCAGTGTTGTGCACCAACACAACAGCACCAATGCTTCAGACTCAGAGACAGGCTTTCTTAGGAAACTTCTATGATTCTTTGGAAGCCTTAACCGCTTTGGTTACAAGGCAAAGATATGCACTTGTTGTTAAGGGACTACTGAAAATAATACCACTGTCTATGCTTTTGTGCATGAAAGATCTTTCAAAACCAGATTGTGATGTCTGCTTCGCAAAGTGCAAGACACGTCTCCTTAGGTGCTCTCCATTTCAGAGAGGTATTGTTGGTGGCAGGCTTTTCTTTGATGGGTGCTATCTTAGGTATGATGGCTACAACTTCTTCAATGAGAGTCTCAGTCCTTGGGACGTTACTGTTTGTGGTAGTGAAGATTTTAGTGGGAATTGGAGTGTGTATAAGGCCAATACTGTGGAGTTGGTGGAAAATTTGAGCATTGAAGTACCAAAGAATGAAGGGTTCTTTGTAGGGTATGTGAGTCGAAGGAATGTGACGGTTTATGGGTTGGCTCAATGCTGGAAATATGTGAATGGAAGTGCCTGTCAGAACTGCTTGGCTGAAGCTGTCACTAGAATTGATTCATGTGCTCCAAAACAAGAAGGGAAGGCACTGAATGCGGGATGTTACTTGATGTATTCCACACACAATTTCTATAATAGTTCAAACCACAATGCCCCTCAAGAGAATCAAGAAAGAAGACAATTTGGTGTACTTTGGGACACAGTGAACAAGTCCAAACTAAATATTGCATATGAAATTCTTGAAAAAGCTACAGATTACTTCAGTGATTCCAATAAGCTAGGACAAGGGGGATCAGGATCAGTTTATAAAGGAGCTCTGCCAGATGGAACTACCGTGGCTATAAAAAGGCTTAACTTTAACACATCACAGTGGGCTGATCATTTCTTCAATGAGGTTAATTTGATCAGTGGCATTCATCACAAAAATTTAGTGAAGCTTTTAGGATGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATTCGTGCCTAATCATAGCCTCCATGATCACCTTTCTGGTAGAATGAATTCTCAACAATTGACTTGGGAAGTCAGGCATAAAATGATACTGGGAACGGCAGAGGGCTTGGCCTATCTTCATGAGGAATCACAAAGAATCATTCATAGAGATATAAAATTAGGCAATGTTCTTATTGATGATGACTTCACGCCCAAGATTGCTGATTTTGGACTTGCTAGGTTATTTCCAGAAGACAAGTCCCATCTTAGCACAGCCATCTGTGGCACATTGGGTTATATGGCTCCTGAATATGTAGTGCTAGGGAAGTTAACTGACAAAGCAGATGTCTACAGTTTTGGAGTTCTAATTATGGAAATGATATCCGGCAGAAAGAGCAAATCCTTCGTTGACAATTCATATTCCATCCTACACACGGTTTGGAACCTTTATGGATCAAACAGGCTATGTGACATTGTTGATCCAATCCTAGAGGGAAATTATCCGGCAGAGGAAGCATGTAAACTCCTTAAGATAGGGTTGCTTTGTGCTCAAGCATCTGCGGAGCTTAGGCCACCAATGTCAGTAGTTGTGGAAATGATTAACAAAAATCATGAAATTACTCAGCCAACACAACCACCATTTCTTAGTTGTGCTAGTGCACAATTCAGCAAATCTATTTTACCAGGAGAGAGTTTTCAGTCTAGATCCTACACTCAGTCTTCACAGGACAGCATGACCGAAAGTCTGATTCAGCGAGCATAAAT 1755 0.4114 MLQTQRQAFLGNFYDSLEALTALVTRQRYALVVKGLLKIIPLSMLLCMKDLSKPDCDVCFAKCKTRLLRCSPFQRGIVGGRLFFDGCYLRYDGYNFFNESLSPWDVTVCGSEDFSGNWSVYKANTVELVENLSIEVPKNEGFFVGYVSRRNVTVYGLAQCWKYVNGSACQNCLAEAVTRIDSCAPKQEGKALNAGCYLMYSTHNFYNSSNHNAPQENQERRQFGVLWDTVNKSKLNIAYEILEKATDYFSDSNKLGQGGSGSVYKGALPDGTTVAIKRLNFNTSQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEFVPNHSLHDHLSGRMNSQQLTWEVRHKMILGTAEGLAYLHEESQRIIHRDIKLGNVLIDDDFTPKIADFGLARLFPEDKSHLSTAICGTLGYMAPEYVVLGKLTDKADVYSFGVLIMEMISGRKSKSFVDNSYSILHTVWNLYGSNRLCDIVDPILEGNYPAEEACKLLKIGLLCAQASAELRPPMSVVVEMINKNHEITQPTQPPFLSCASAQFSKSILPGESFQSRSYTQSSQDSMTESLIQRA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01851 569 ProSiteProfiles Gnk2-homologous domain profile. 1 96 IPR002902 -
Pste1g01851 569 Pfam Protein kinase domain 250 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01851 569 Gene3D Phosphorylase Kinase; domain 1 208 324 - -
Pste1g01851 569 SMART serkin_6 249 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01851 569 ProSitePatterns Protein kinases ATP-binding region signature. 255 277 IPR017441 GO:0005524
Pste1g01851 569 FunFam Cysteine-rich receptor-like protein kinase 2 325 524 - -
Pste1g01851 569 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 46 555 - -
Pste1g01851 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Pste1g01851 569 Gene3D - 105 205 IPR038408 -
Pste1g01851 569 Gene3D - 6 96 IPR038408 -
Pste1g01851 569 CDD STKc_IRAK 255 518 - -
Pste1g01851 569 MobiDBLite consensus disorder prediction 549 569 - -
Pste1g01851 569 FunFam Cysteine-rich receptor-like protein kinase 2 215 324 - -
Pste1g01851 569 FunFam Cysteine-rich receptor-like protein kinase 3 105 205 - -
Pste1g01851 569 Gene3D Transferase(Phosphotransferase) domain 1 325 528 - -
Pste1g01851 569 ProSiteProfiles Gnk2-homologous domain profile. 102 205 IPR002902 -
Pste1g01851 569 SUPERFAMILY Protein kinase-like (PK-like) 236 550 IPR011009 -
Pste1g01851 569 ProSiteProfiles Protein kinase domain profile. 249 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01851 569 Pfam Salt stress response/antifungal 113 202 IPR002902 -
Pste1g01851 569 Pfam Salt stress response/antifungal 42 92 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01851 Pste-Chr1 5707147 5710020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01851 5 413 Receptor kinase-like Gene Family AT1G70530 54.343 3.51e-173 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g01851 Pkinase 2.3e-46 CL0016