Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01828 ATGTCCTCGGACTCTTTTAACAAAGAAAGGCCTTTTGAGTCCTCTTGGACACCAAAACAGAACAAGCTATTTGAAAAAGCACTAGCAAAATATGACAAGGATAGCCCTGACCGTTGGCAGAATGTAGCTAAAGCAGTTGGTGGCAAATCTGCAAATGAAGTTAAGAGACACTACGAAATCCTCTTGGAGGATCTCAAACGCATAGAGTCTGGTCATGTTCCACTTCCCAAGTACACATCAACAGCAACCAGCACCAATGTTGATGAAGAAGAGAGGCTTTTGAAGTATCTTGAACTGAAATGA 303 0.4191 MSSDSFNKERPFESSWTPKQNKLFEKALAKYDKDSPDRWQNVAKAVGGKSANEVKRHYEILLEDLKRIESGHVPLPKYTSTATSTNVDEEERLLKYLELK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01828 100 FunFam Transcription factor SRM1 8 75 - -
Pste1g01828 100 CDD SANT 15 62 IPR001005 -
Pste1g01828 100 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Pste1g01828 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Pste1g01828 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 87 IPR044636 GO:0003700
Pste1g01828 100 SMART sant 12 64 IPR001005 -
Pste1g01828 100 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Pste1g01828 100 Gene3D - 10 75 - -
Pste1g01828 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01828 Pste-Chr1 5622772 5624267 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste1g01828 Myb_DNA-binding 1.7e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01828 1 5622772 5624267 Pste1g01828 1 5622772 5624267 ECH
Pste1g01828 1 5622772 5624267 Pste7g01498 7 13725398 13726687 ECH