Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01814 ATGTTTCAAGAAGAAGGGTCATCTTCTGTGACTTCTTCACCTCTTGAGTTCTTTTCCATGATGTCTCTTTCTCCTGGCTCAGGCTCTTCTTCCCATACATGGCATAGGACACTGATATCTGAGGAAAGAGGTTTGTATTTGATTCATTTGTTGCTGAGTTGTGCAAATTGTGTAGCTATGGGTAATCTTGAAGGTGCTAACATCAGGCTTGGGCAGATTTCCCAACTTGCTTCTCCTGATGGGGATACTATGCAGCGAATTGCTTCATATTTCACTGAAGCACTCGCTGATAGGATACTCAAAACATGGCCTGGCCTTCACAGGGCCCTCAATTCCACCAGGATAAACATGGTGTCTGATGAAATTCTTGTTCATAAGCTCTTCTTTGAGCTTTGCCCGTTCCTCAAGTTGTCATATATTCTGACAAATCAGGCTATTTTTGAAGCCATGGAAGGGGAGAAAATGGTGCACATAATTGATCTCAATGCCACCGGGCCTGCACAGTGGATTGCTCTTCTCCAAGTTCTGAGTGCACGCCCTGGAGGGCCTCCTCATTTGAGAATTACCGGGGTTCATCCTCAGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTCAAGAGGCTGAAAAGTTGGACATCCCATTCCAATTCAACCCTGTGATCAGCAAGTTAGAAAATCTTGAGTTTGACAAACTTCGAGTCAAAACTGGGGAAGCTCTAGCAATAAGTTCCATTCTGCAGTTACACTCCCTTCTGGCCTTGGATGATTATGCCTGGCGGCGTCTGTCAAGAAATTCAAATGCAGTTTTCATGCAGAACACACTGGGAGATTTGCTTGATAAGGATGTGGCTAATGGCTATAGCCCAAATGCTGATTCAGCCTCATCCTCCCCAGGGTCTTCATTGGAGAGATTTCTCAATGCCATGTGGGGGTTTTCACCAAAGGTCATGGTTGTGACTGAACAAGACTCTAATCACAACGGTTCAGCCCTGATGGATAGGCTGCTGGAAGCTCTATACTCCTATGCTGCATTGTTTGACTGCTTGGAGTCTACGATCTCAAGATCCTCCTTGGATAGAATGAAGCTTGAGAAGATGCTTTTTGGTGAACAAATCAAGAACATCATAGCCTGTGAGGGAGCTGAAAGAAGGGAAAGGCATGAGAAGCTGGATAAGTGGACTCGTAGATTTGATTTGTCTGGCTTTGACAATGTGCCTTTAAGCTATTCTGGTATGTTGCAGACAAGGAGGTTCTTGCAGAGCTATGGTTGTGAGGGGTATAGGATGAAGGAGGAAAACGGCTCTGTAATGATTTGCTGGGAGGACCGTTCGTTGTTTTCTGTAACAGCTTGGAGATCAAGGAAGTAA 1371 0.4493 MFQEEGSSSVTSSPLEFFSMMSLSPGSGSSSHTWHRTLISEERGLYLIHLLLSCANCVAMGNLEGANIRLGQISQLASPDGDTMQRIASYFTEALADRILKTWPGLHRALNSTRINMVSDEILVHKLFFELCPFLKLSYILTNQAIFEAMEGEKMVHIIDLNATGPAQWIALLQVLSARPGGPPHLRITGVHPQKEVLDQMAHKLTQEAEKLDIPFQFNPVISKLENLEFDKLRVKTGEALAISSILQLHSLLALDDYAWRRLSRNSNAVFMQNTLGDLLDKDVANGYSPNADSASSSPGSSLERFLNAMWGFSPKVMVVTEQDSNHNGSALMDRLLEALYSYAALFDCLESTISRSSLDRMKLEKMLFGEQIKNIIACEGAERRERHEKLDKWTRRFDLSGFDNVPLSYSGMLQTRRFLQSYGCEGYRMKEENGSVMICWEDRSLFSVTAWRSRK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01814 456 ProSiteProfiles GRAS family profile. 38 453 IPR005202 -
Pste1g01814 456 Pfam GRAS domain family 47 453 IPR005202 -
Pste1g01814 456 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 449 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01814 Pste-Chr1 5562601 5563971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01814 1 456 GRAS Transcription Factor Family AT1G50420 64.718 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste1g01814 GRAS 1.2e-135 CL0063