Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01796 CAAACCCAAACAAAAACCCTAACTTTCTCTCTCCTCTCTCACTCCCTCATCCACTTCACGCGTTTTCTCTTCGAATTTTCCGCAATTCGATTCCAATTTCCCTCAGCACAGATCACGCAGATCACGTTCGTCTCCGCACTGCACAATTAGCGCGCGCACTCCATGAATGGACGACAAAGACAGAGCAGCCTCCGATCCCTCCGCCGCCGCAACTGACTTCGCCGGCGACACTAGCTGGACACTCTCCGCCGATGACTCCGACGCCGCGTACCTCTTCTCCGGCGACCGGGAGCGGAGCATACTCAGGGATTTCGGGTGGAACCTCGAGCCGGACCAGCCGAACCGGATCAGCACCGACGATAGATTGTGGATGCCGGTTCACTCCTCTCTGATCGGTTCGATCGAACCGGCTGCAGCTGCCTCGTCCCGGTCGAATAACCAATCGGTGTCGTCCAGCTCCAGCGAGGATCAGCCGGAGAAATCCACCGTTTCCGACGAGAAACCGCCTGAGATACCGAGCAAAGGTAAAAAGAAGGGGCAAAAGCGAATACGGCAACCGCGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTATAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCTTTCCCTAGAAGCTACTACCGCTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAACGGTCTTCGGAGGACCCAACGATTGTGATTACCACATATGAAGGCCAACACTGTCATCACACCGTTGGATTTCCTCGAGGGGGAATCATTAATCAGGAAACTGCATTTGCAGGCCAGTTGGCTCCTACAATGTCACAATTCTATTATCCAATTCAATTACCGAGAGAGAATAATAATACTTTCAGCTCTATTTGTCAGCCTTGCCAAGCACAGGATGAAGCTGGAGGATCCAGTACTGAAATGCCAGCTGATGCATCGTCACAGCCTGCCACGGATGAAGGGTTGCTTGGAGATATTGTGCCCCCGGGAATGCGAATCAGATAAGAGAATTATTCGATGGATTGCACTTGATCCTGTTATCTATGTCCTTGTATATTACTTCCCAGCATTTGAATGGCCAATAATTCTTGTCATAATTTAATTCAGCCGATGATGAGGTAGAAGTGGAGCAGAGCAAATGCATGGGCATGCATGCATCTTTGTTTTCTGCATACTCTGAACAAGTAGGGCAGAAGTGGCAGCAATTTGTTTCTTTTAGCAGCAAGAACCTTTTAGCGATCTATCGTCTCGAGAGGCGAATCTGGTAGTCATGCATGGGTACTGTATTACCTCAGTAGCAGGTAATTAATTAATTATGTATCTTGGGTCATATTTGGACCTTCATTCATTTAGTGATAGTTATATATATTATGTATCTGTATATGTAAGGTATAGAAACCGTGAATAATGTATATTAACTAAGCTCCTTCCAAGCCTTTGTACGATTTATTTATATAAAACCTAAATTGGTAGAACTCTGGTGGGCATCGTTGATAATGATTAATGAATGTAGAAGTGCATATTTTGTC 1560 0.4654 MDDKDRAASDPSAAATDFAGDTSWTLSADDSDAAYLFSGDRERSILRDFGWNLEPDQPNRISTDDRLWMPVHSSLIGSIEPAAAASSRSNNQSVSSSSSEDQPEKSTVSDEKPPEIPSKGKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIINQETAFAGQLAPTMSQFYYPIQLPRENNNTFSSICQPCQAQDEAGGSSTEMPADASSQPATDEGLLGDIVPPGMRIR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01796 289 MobiDBLite consensus disorder prediction 252 289 - -
Pste1g01796 289 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01796 289 MobiDBLite consensus disorder prediction 83 103 - -
Pste1g01796 289 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 238 IPR044810 GO:0003700
Pste1g01796 289 MobiDBLite consensus disorder prediction 1 24 - -
Pste1g01796 289 MobiDBLite consensus disorder prediction 252 268 - -
Pste1g01796 289 ProSiteProfiles WRKY domain profile. 139 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01796 289 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01796 289 MobiDBLite consensus disorder prediction 82 132 - -
Pste1g01796 289 MobiDBLite consensus disorder prediction 104 121 - -
Pste1g01796 289 SUPERFAMILY WRKY DNA-binding domain 136 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g01796 289 Gene3D WRKY domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g01796 289 FunFam WRKY transcription factor 57 130 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01796 Pste-Chr1 5511713 5518399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01796 21 287 WRKY Transcription Factor Family AT1G69310 52.414 8.29e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste1g01796 WRKY 1.8e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03970 6 28948656 28950358 Pste1g01796 1 5511713 5518399 PCT