Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01774 CAACACCCCTTTATAAGAAGATTATGGGGTGCATTTGCTCAAAAGACTACTCAGACAAAGACAAAGACAAAGGTGACGAACATGAGAAGGAGAAAGAAAGGGAGACGAACAAGTCTTCAGTACAATTGGTTGCTCCTATTATCTCAATTGCACAATTAGATAGTGGTAGCACAAATAGTTTGGTTCCCATAATGGCCAAATCATCATCGCAAGTGGTTAGAGGATTTGTAAAAACGCCACTTGAGAACAAAAGTAATCACTTAGATGCCACAATAAGCCAACACCAAAGGTGTTTGACAATGAGTGGTGGTTTATGTGAAAGAAAACCACTAATGAGTAGAATACTTAGTGTGCAACATTGTGTGGGAGAAAATGTTGATATTGGATGGCCATTGTGGTTATCTTCAGTAGCACCAGAAGCCATCAAAGGGTGGGTGCCTCGACGAGCAGACGCTTTCGAAAAATTTGACCAAGTTGGACAAGGGGCATATAGTAGTGTACATAAAGCTCGTGACCTTGAGACTGGTAAAATTGTGGCTTTGAAGAAAGTTCGTTTTTCAAGTAAAGATGCAGAAAGTGTCCGATTCATGGCAAGGGAAATATATATCTTGCGTCAACTTGATCATCCTAATGTCATGAAGCTTGAGGGTCTTATTACATCGAGAACATCAACTAGTTTGTACCTAGTTTTTGAGTACATGGAACATGACCTCACTGAGATAGCAACTACGCATGGTGCGAAATTAACTGAACCTCAGATAAAATGTTACATGCAACAACTACTTCTTGGGCTTGAACATTGTCATAGTCGTGGCGTGTTGCATCGTGACATCAAGGGTTCAAATCTTCTTATTGACAATAATGGAAACCTTAAGATTGGAGATTTTGGTTTGTCAACAGTTTATGATCCTAATAAAAAGCAACCATTGACAAGTCGTGTTGTGACTTTATGGTATAGGGCACCTGAGCTTTTGCTAGGTGCTACAGAGTATGGAGTTGCAATTGACTTGTGGAGTGTTGGTTGCATTCTAGCAGAGTTGCTACTGGGGAAGCCGATCATGCCCGGAAGAACAGAGGTGGAACAAATGCATAAAATTTTTAAGCTCTGTGGTTCACCATCAGAAGATTATTGGCAGAGAACAAAATTTCCCCATGCAACAAGTTTTAAGCCACAACACCCTTACAACCGCAAAATTTTTGAAACATTTAAAAATTTTTCTCCTCCAGCTTTCGCTCTTGTTGATAAGCTCCTTGCTATAGAACCAGAAGATCGAGGATCAGCAACTTCTTCACTTGAGAGTGAGTTCTTCACTACAAGCCCATTACCTTGTGATCCCTCAAGTTTACCAAAGTTTTCACGAAAAAAGGAGTTTGATTCCAAACATCGAGAAAAGGAAGCAACA 1403 0.4013 MGCICSKDYSDKDKDKGDEHEKEKERETNKSSVQLVAPIISIAQLDSGSTNSLVPIMAKSSSQVVRGFVKTPLENKSNHLDATISQHQRCLTMSGGLCERKPLMSRILSVQHCVGENVDIGWPLWLSSVAPEAIKGWVPRRADAFEKFDQVGQGAYSSVHKARDLETGKIVALKKVRFSSKDAESVRFMAREIYILRQLDHPNVMKLEGLITSRTSTSLYLVFEYMEHDLTEIATTHGAKLTEPQIKCYMQQLLLGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLSTVYDPNKKQPLTSRVVTLWYRAPELLLGATEYGVAIDLWSVGCILAELLLGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKFPHATSFKPQHPYNRKIFETFKNFSPPAFALVDKLLAIEPEDRGSATSSLESEFFTTSPLPCDPSSLPKFSRKKEFDSKHREKEAT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01774 460 MobiDBLite consensus disorder prediction 422 460 - -
Pste1g01774 460 ProSiteProfiles Protein kinase domain profile. 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01774 460 SUPERFAMILY Protein kinase-like (PK-like) 139 437 IPR011009 -
Pste1g01774 460 MobiDBLite consensus disorder prediction 442 460 - -
Pste1g01774 460 PANTHER CELL DIVISION PROTEIN KINASE 143 435 - -
Pste1g01774 460 Gene3D Transferase(Phosphotransferase) domain 1 228 460 - -
Pste1g01774 460 MobiDBLite consensus disorder prediction 422 438 - -
Pste1g01774 460 MobiDBLite consensus disorder prediction 7 30 - -
Pste1g01774 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pste1g01774 460 FunFam probable serine/threonine-protein kinase At1g54610 228 460 - -
Pste1g01774 460 FunFam probable serine/threonine-protein kinase At1g54610 132 227 - -
Pste1g01774 460 CDD STKc_CDK9_like 145 429 - -
Pste1g01774 460 Gene3D Phosphorylase Kinase; domain 1 132 227 - -
Pste1g01774 460 Pfam Protein kinase domain 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01774 460 SMART serkin_6 145 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01774 460 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524
Pste1g01774 460 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01774 Pste-Chr1 5423791 5426362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01774 137 458 Core Cell Cycle Gene Families AT5G10270 49.852 6.21e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste1g01774 Pkinase 8.2e-71 CL0016