Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01760 TGGAAAATTAATTAATACCAACAGGGAACAGGAACAGTAGTAGCAGAGGGTGAAGGTGAGGCTGAGACAGAGCAGTGTCTGAGTCTGAAACATCATTCTCGTGATTCCCGAACATTCTCTTCTTATTCCAACTTCTTCTTCTTCCTCCTCCGTTAGGGTTTCCTTAATGCTTCATGCGCCTTCGCTCTCACATTCCCATTCATCCTTGACTCCACAATGTCCGGCCCGCTCGACCGTTTCGCCAGACCCTGTTTCGAAGGTTTCTCCGGGAGTGACGAGAAGAAAGAGAGGAGATCTGATTTTGAGAACTCCGAAGACGAAAGAAGGACCAGAATTGGATCTCTGAAGAAGAAGGCGCTGAATGCTTCCTCCAAGTTCAAGCATTCGCTCAAGAAAAAGAGCAGCAGAAGAAAAAGCGATGGCCGTGTTAGCTCTGTTTCTATCGAAGATGTTCGCAATTTCGAGGAGCAGCAGGCCGTTGACGCATTTCGCCAATCCTTGATTATGGACGAATTGCTCCCTGCAAAACACGATGATTACCACGTCATGCTAAGGTTCCTCAAAGCTAGGAAGTTTGATATAGAAAGGGCAAAGCATATGTGGGCTGATATGCTACAATGGAGGAAGGAGTTTGGTGCCGACACTATTATGGAGGATTTTGAGTTCAAAGAATTAAATGAAGTTGTCAAGTATTATCCACATGGCCATCATGGCGTTGATAGGGAGGGAAGGCCTGTTTACATTGAGAGACTTGGGAAAGTGGATCCCAACAAATTGATGCAGGTTACCACCATGGATAGATATGTAAAATACCATGTGCAGGAGTTTGAGAAAGCTTTTAAGATAAAATTTCCTGCTTGCACAATTGCCGCCAAAAGGCACATAGATTCCAGCACCACGATATTAGATGTTCAGGGCGTGGGCCTTAAGAACTTTACAAAGTCTGCTCGGGATCTCATTATGCGGTTGCAAAAGATAGACGGTGACAATTACCCTGAGACTTTGTGCCAAATGTTTATCATAAATGCTGGTCCTGGATTTAGGTTGCTATGGAACACTGTCAAGTCTTTCCTTGATCCCAAAACAACTTCAAAGATTCATGTTCTTGGAAATAAGTACCAAAGCAAATTGCTTGAAATAATTGATGCCAGTGAGCTGCCAGATTTCCTGGGAGGTACCTGTACCTGTGCAGATCAGGGTGGTTGCCTCAGATCTGATAAAGGGCCCTGGAAAAACCCTGAAATATTGAAGATGATTCTCAGTGGTGAAGCACGGCGAGCAAGGCCAGTAGTAAAAGTCCTAAACAGTGAAGGGAAGGTCATTGCGTATGCCAGACCACAATACCCAATGGTAAAAGGCAGTGATACATCCACAGCTGAATCTGGGTCTGAAGCTGAAGACATAGCTTCTCCAAAAGCAATGAAAAGCTACTCACACCTGAGGTTGACACCTGTTCGTGAGGAAGCTAAGGTAGTTGGAAAGTCAAGCTATTCTGGTGCTGGTAACTTAGCTGGGTATGATGAATATGTACCAATGGTGGATAAAGCTGTTGATTCTAGCTGGAAGAAGCAAGCATCACTCCAGAGGTCTCAAACTTCAAAAGGAGCACCTCCCCTCCCTGACACTCCAAAAACTCCTGAAGGGGTTCAAGCTCGGATTACAGTAGCTCTAACTGTCTTCTTTATGACACTGTTTGCTCTCTTCCGTTCAGTTTCATGCCATGTGACCAAGAAGCTTCCTGCCATATCATCCAATAATGATCGTGGAACCTCAGAGCCATCACTTGATACAAGAAACATTGATGACTGTCCTCTTCCTTCACCAACTCCAGCATGCACAGAGGCAAATCTCCTTTCCTCGCTGATGAAAAGGTTGGGTGAGCTTGAAGAGAAGGTAGACACACTCCAATCTAAGCCATCTGAGATGCCTTATGAGAAAGAGGAATTGCTAAATGCTGCTGTATGTCGGGTGGATGCTTTGGAAGCAGAGCTAATTGCAACTAAAAAGGCTCTATATGAAGCATTAATGAGGCAAGAAGAATTGCTTGCTTACATTGATAGTCAAGAAGAAGCTAAGTTACAGAAGAAGTTTTGCTGGTGAGTTTTGGTTGCTGGTAGAGACTCTGGAAGAGGGTGTTTTCAAATCATGGTATTCGTAGTGCTGACTTTGCACATGATGTTAAACTCTGAACACTGATTTTCAGTTTAATGAGTAAAGTCGAGAATTGTTTCAAACTCGTGTATAGCTAATGGCTTCTTACCGAATTAAACACAACCCTTGATTTTTGCTAGCATTTTTGTTTTTCCTCGGTCACCTTTGTTGTATTTCGTGTGATTATCGTTGTTGGTTGGAAAATCATTTGTTCTTCTGATCTCATAACTTGCA 2385 0.4356 MSGPLDRFARPCFEGFSGSDEKKERRSDFENSEDERRTRIGSLKKKALNASSKFKHSLKKKSSRRKSDGRVSSVSIEDVRNFEEQQAVDAFRQSLIMDELLPAKHDDYHVMLRFLKARKFDIERAKHMWADMLQWRKEFGADTIMEDFEFKELNEVVKYYPHGHHGVDREGRPVYIERLGKVDPNKLMQVTTMDRYVKYHVQEFEKAFKIKFPACTIAAKRHIDSSTTILDVQGVGLKNFTKSARDLIMRLQKIDGDNYPETLCQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPDFLGGTCTCADQGGCLRSDKGPWKNPEILKMILSGEARRARPVVKVLNSEGKVIAYARPQYPMVKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEAKVVGKSSYSGAGNLAGYDEYVPMVDKAVDSSWKKQASLQRSQTSKGAPPLPDTPKTPEGVQARITVALTVFFMTLFALFRSVSCHVTKKLPAISSNNDRGTSEPSLDTRNIDDCPLPSPTPACTEANLLSSLMKRLGELEEKVDTLQSKPSEMPYEKEELLNAAVCRVDALEAELIATKKALYEALMRQEELLAYIDSQEEAKLQKKFCW 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01760 627 Gene3D - 72 139 - -
Pste1g01760 627 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 24 616 - -
Pste1g01760 627 MobiDBLite consensus disorder prediction 379 398 - -
Pste1g01760 627 MobiDBLite consensus disorder prediction 449 474 - -
Pste1g01760 627 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Pste1g01760 627 PRINTS Cellular retinaldehyde-binding protein signature 312 321 - -
Pste1g01760 627 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Pste1g01760 627 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Pste1g01760 627 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Pste1g01760 627 MobiDBLite consensus disorder prediction 449 466 - -
Pste1g01760 627 CDD SEC14 150 321 IPR001251 -
Pste1g01760 627 SMART sec14_4 152 323 IPR001251 -
Pste1g01760 627 Coils Coil 546 566 - -
Pste1g01760 627 Pfam CRAL/TRIO domain 159 320 IPR001251 -
Pste1g01760 627 SUPERFAMILY CRAL/TRIO N-terminal domain 82 148 IPR036273 -
Pste1g01760 627 MobiDBLite consensus disorder prediction 1 70 - -
Pste1g01760 627 Pfam CRAL/TRIO, N-terminal domain 105 131 IPR011074 -
Pste1g01760 627 SUPERFAMILY CRAL/TRIO domain 152 345 IPR036865 -
Pste1g01760 627 Gene3D - 140 350 IPR036865 -
Pste1g01760 627 MobiDBLite consensus disorder prediction 16 42 - -
Pste1g01760 627 MobiDBLite consensus disorder prediction 49 66 - -
Pste1g01760 627 FunFam SEC14 cytosolic factor 140 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01760 Pste-Chr1 5398666 5404632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01760 85 317 Acyl Lipid Metabolism Gene Families AT5G47730 27.459 1.61e-19 88.6