Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01750 GGAAGAAAGAAGAAGAGGGAAGAGTATTGGTTCCGAATTCAAATTGATCCACACCAAACCACCAGTGCAAATCAAATTCGAAGTCTTACAGCACAGCTTTCTTTCGTGATACCAGGAACCTAAATCATTTAGCTAGTGCTAAAGTGGCATCCACCAGAAATCGATCCCAAGAATGATTCTTATTTCTGGAACCATGCCTCTGTTCTTCTGCAGTGTCCCCTGCTTTGTGTTTCTGGTTTGGCATGCACTTTAAAAGTGGTTCCTTTTTGCCACTCCTTTCTCAACTTTGATAATATGCCAATGCGAATCACGTCTGTAAACACAAACGTCCCTTTCCGACTCAACAGTCAACACTCTCCTCTATCCCTTCCCTTTTCTCCCTCACAATCCCAAAAGAAGAGAGCCTTTTAATTACTTCAACAAAGAGAACCGCGTGACTTCCACATCACTCGTGTCCGCTTCCGATTTGTGACTGTTTGCATGCATGGAGAGGAGAAACTATCTTTGTGCTTTCCTTTTTCTCACTCACGAGGGGATGAGCTAGCTCGTGTCTCTCATACCAAGAACAAAGTCCCCTAAAAAGTTAAGCATTCTCATTTCCTCATAGCAATTTAAACCCTTTCTTGCTTCGTGCTCTTTCCCTTCTATAACATGCCGCAACCATTGCTTCTGTCTGTACTTTTATGTGTACTGTGGTCAAGTAGTTTATGTCTAAGGGTGTCCCTGGAGAGAGAGTTACAAATTCTACTTGAGGTCAAGAACACCCAGCTTGAAGACAAAAACAAGAGTCTCAAAAACTGGGTGCCCAACACAGACCATAACCCCTGCAACTGGACCGGCATTACATGCGACACACGAAACCAATCAATTGTCTCCATAGATCTTTCCGAAATTGGAATCTACGGCCAATTCCCCTTCGGTTTTTGTCGCATTGACACCCTTGGAAGCCTCTCTGTGGCTTCCAATTTTCTCACCAACTCTATTTCCCCCAATTCTCTTCTTCTCTGTTCCCACCTCCGTCTCTTAAACCTCTCCGACAATTACTTCGTTGGAGACCTGCCAGAATTCCCGCCGGGGTTCACCGAACTGAGAGAACTGGACTTCTCCAAAAACAACTTCACCGGTGACATTCCGGTGAGTTTTGGATTGTTTCCACATCTGAAAGTGCTTGTTTTATCCGGAAATCTTCTCAGCGGAACAATCCCTTCCTTCTTAGGCAACCTCGGAGAGTTAACTCGTTTGGAACTCGCTTACAACCCCTTCAAACCAGGACCATTACCTCCCCAACTAGGAAACCTTTCTAACCTCCAAATATTGTTCCTCGCAGATGTAAACCTCTTAGGGGAAATTCCACACTCCATCGGGAACCTCACCTCGCTCAAGAACTTGGATTTGTCTCAAAACTCCTTGTCAGGTAACATCCCAGACAGCATTTCAGGCCTTAAAAACGTTGAACAAATTGAACTGTTCGAAAACAAGCTTTCCGGCGAATTGCCCCAAGGTTTAGGAAACCTCAGCAGTTTAGCTCTCTTGGACATCTCTCAGAACGCTCTCACCGGACAACTTCCTCACACAATCGCTTCATTGCATCTCGATTCTCTCAACCTGAACGACAACCTTATGAGCGGAGAAATTCCTGAAAGTTTATCTTCAAACCCAAATCTGCATCAACTGAAACTCTTCAACAACAGCTTCACCGGGAAACTCCCACGAGATCTGGGGAGAAACTCTAGCATACTGGAATTCGATGTCTCAACTAACGACTTCGAAGGAGAATTGCCAAAGTACCTGTGCCAGAGGAACCAACTCCAGCGTCTCATAACGTTCGCAAATCGCTTCTCTGGAACGCTTCCTGACCAGTACGGTGAGTGTCGTTCGCTTCAATATGTCAGAATTCAGGACAACCACTTCTCTGGCCCGGTGCCACCAACATTTTGGGCCCTTAGTGGGCTTCAGTTTCTGGAAATGTCCAACAATGGTTTCCAAGGTCCTGTCTCTGCTTCCATCTCTAGGGCACTCACCAAACTCATTTTATCCGGTAATAGCTTTTCTGGCCAGTTCCCAAAGGAAATATGTGAACTTCATAACCTCGTTGAGATTGACGTCGCCAAGAATCGCCTCACCGGTGAAGTTCCCACGTGCGTAACTGGGTTGGTTAAATTGCAGAAACTTAGACTGCAAGAGAACACCTTCACCGGCGAGATTCCCAGTAACGTAACCCTCTGGACTGACATGACGGAGTTGAACTTATCGTTTAATCGATTCTCCGGTTCAATCCCTCCGGAACTTGGTAATTTACCCGATTTAACGTACTTTGATCTCGCCGTCAATTCTTTAACGGGGGAGATTCCGGTGCAGTTGACGAACCTAAGACTTAACCAGTTCAACGTCTCTGGCAACAAGTTGCACGGGGAGGTACCTTTAGGTTTCAATCACCAAGTCTACTTGTCGGGTCTAATGGGAAACGCTGATCTCTGTAGCGCCGTTATCAAAACCCTGCCTTCTTGTTCCAAACGCAGGCCGTTTTCTCTGCTTACTATTGTCGTTTTAGTCGCTTGCGTTTCGCTCCTTGTGGGGTCCTTGTTGTGGTTCCTCAAGAGCAAAACGCAAGCTTTTGGCGGCAAATCCAAGCGCTCGTATATGTCAACCGCGTTCCAAAGAGTGGGGTTCGGTGAAGAAGACATAGTTCCGAGCTTAACAGGCGAGAACATGATTGGGTCAGGGAGTTCGGGTCGGGTGTATAGGGTGATGCTGAAGACGGGGCAGACGGTGGCGGTGAAGAAACTGTTTGGTGGTGCGCAAAAGCCTGACACGGAATTGGTGTTCAGGGCAGAGATAGAGACGTTGGGTAGGATTCGGCATGCGAATATTGTGAAACTGTTGTTTTGTTGCAGTGGTGATGAGTTTAGAATACTGGTGTATGAGTACATGGAGAATGGAAGCTTAGGGGATGTGTTGCATGGTGAGGACAAGTGTGGGAAGTTAATGGATTGGTCCAGGAGGTTCGCAATTGCTGTGGGTGCGGCTCAGGGGTTGGCTTATTTGCACCATGATTGTGTGCCTGCTATTGTTCACAGGGACGTCAAGAGTAATAACATTTTGCTGGACCATGAGTTTGTGCCACGAGTAGCAGATTTTGGGCTTGCTAAGACATTGCAGCGTGAAACCACCCAGGGTGATGCTATGTCCAGGGTTGCAGGATCATATGGTTACATTGCTCCAGAGTATGCTTATACAATGAAAGTGACTGAGAAGAGCGATGTCTATAGTTTTGGGGTGGTGCTGATGGAATTGATCACGGGAAAGAGGCCAAATGATTCTTCATTTGGTGAGAACAAGGATATAGTAAAATGGATCACTGAGACTGTTTTATCACCATCTCCAGAAAGAGAACGTGGCAATATTGAAGGAGGAAAAAATTATATTATGAGCCAGATTGTGGACCCGAGATTGAACCCAGCCACTTGTGATTATGAAGAGATTGAGAAGATTTTAAATGTGGCCCTACTCTGCAGCTCAGCGTTTCCCATTAATAGACCTTCAATGAGGAGGGTGGTTGAATTGCTCAAGGACCATAAACTGTCATATTGAACTTCGCAAGCTCTCTCCACAATAGGACCTAAATTTTGTTTTGGACTGGCCTTAGGTACCATTTGAAAGTGATTGATGGCTGTGTATTAGGAAAACTTAGCATATTTACCCGTTAAGGATTAAATAGCTTTATGAGTGACTGTTTAGTTACTCACTTTATGTAAATCCTTTTGTACATATGATGACTC 3779 0.4546 MPQPLLLSVLLCVLWSSSLCLRVSLERELQILLEVKNTQLEDKNKSLKNWVPNTDHNPCNWTGITCDTRNQSIVSIDLSEIGIYGQFPFGFCRIDTLGSLSVASNFLTNSISPNSLLLCSHLRLLNLSDNYFVGDLPEFPPGFTELRELDFSKNNFTGDIPVSFGLFPHLKVLVLSGNLLSGTIPSFLGNLGELTRLELAYNPFKPGPLPPQLGNLSNLQILFLADVNLLGEIPHSIGNLTSLKNLDLSQNSLSGNIPDSISGLKNVEQIELFENKLSGELPQGLGNLSSLALLDISQNALTGQLPHTIASLHLDSLNLNDNLMSGEIPESLSSNPNLHQLKLFNNSFTGKLPRDLGRNSSILEFDVSTNDFEGELPKYLCQRNQLQRLITFANRFSGTLPDQYGECRSLQYVRIQDNHFSGPVPPTFWALSGLQFLEMSNNGFQGPVSASISRALTKLILSGNSFSGQFPKEICELHNLVEIDVAKNRLTGEVPTCVTGLVKLQKLRLQENTFTGEIPSNVTLWTDMTELNLSFNRFSGSIPPELGNLPDLTYFDLAVNSLTGEIPVQLTNLRLNQFNVSGNKLHGEVPLGFNHQVYLSGLMGNADLCSAVIKTLPSCSKRRPFSLLTIVVLVACVSLLVGSLLWFLKSKTQAFGGKSKRSYMSTAFQRVGFGEEDIVPSLTGENMIGSGSSGRVYRVMLKTGQTVAVKKLFGGAQKPDTELVFRAEIETLGRIRHANIVKLLFCCSGDEFRILVYEYMENGSLGDVLHGEDKCGKLMDWSRRFAIAVGAAQGLAYLHHDCVPAIVHRDVKSNNILLDHEFVPRVADFGLAKTLQRETTQGDAMSRVAGSYGYIAPEYAYTMKVTEKSDVYSFGVVLMELITGKRPNDSSFGENKDIVKWITETVLSPSPERERGNIEGGKNYIMSQIVDPRLNPATCDYEEIEKILNVALLCSSAFPINRPSMRRVVELLKDHKLSY 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01750 979 Pfam Protein kinase domain 686 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01750 979 FunFam Leucine-rich repeat receptor-like protein kinase TDR 312 621 - -
Pste1g01750 979 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 65 311 - -
Pste1g01750 979 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Pste1g01750 979 Gene3D Phosphorylase Kinase; domain 1 676 759 - -
Pste1g01750 979 Pfam Leucine rich repeat 145 203 IPR001611 GO:0005515
Pste1g01750 979 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Pste1g01750 979 SUPERFAMILY L domain-like 314 591 - -
Pste1g01750 979 SMART serkin_6 682 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01750 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Pste1g01750 979 SUPERFAMILY RNI-like 72 388 - -
Pste1g01750 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 194 973 - -
Pste1g01750 979 SUPERFAMILY Protein kinase-like (PK-like) 681 972 IPR011009 -
Pste1g01750 979 Gene3D Ribonuclease Inhibitor 313 624 IPR032675 -
Pste1g01750 979 Gene3D Ribonuclease Inhibitor 23 207 IPR032675 -
Pste1g01750 979 FunFam leucine-rich repeat receptor-like protein kinase TDR 760 979 - -
Pste1g01750 979 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 658 759 - -
Pste1g01750 979 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Pste1g01750 979 ProSiteProfiles Protein kinase domain profile. 682 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01750 979 Gene3D Transferase(Phosphotransferase) domain 1 760 978 - -
Pste1g01750 979 Gene3D Ribonuclease Inhibitor 208 312 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01750 Pste-Chr1 5374268 5378304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01750 22 976 Receptor kinase-like Gene Family AT5G65710 56.276 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g01750 Pkinase 1.2e-45 CL0016