Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01744 ATGGCTTCCTCAAGTGGAACATCTTCAGGCTCATCTCTGCTTCAGAACTCTGGTTCTGAGGAGGATTTGCAGGCGGTGATGGATCAGAGAAAGAGGAAGAGAATGATATCAAATCGAGAATCTGCACGGCGATCTCGAATGAGGAAGCAGAAGCACTTGGACGATCTTGTTTCCCAAGTGGCTCAACTGAGAAAGGAGAATCAGCAGATACTCACAAGCGTCAACATCACCACGCAACAGTACCTTAGCGTTGAGGCTGAGAACTCAGTGCTGAGGGCTCAGGTGGGAGAGCTTAGCCACAGGTTAGAGTCTCTGAACGAGATCATTGACGTGTTGAATGCCACCACCACTGCTGCTTTTGGAGCTCCACCCCCCACCTTCATTGAGCCACCCAATAATACCTTCTTCAACCCCATGAATATGGGCTATCTCAACCACCCTATTATGGCTTCTGCAGACATATTGCAGTACTAG 474 0.4895 MASSSGTSSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIIDVLNATTTAAFGAPPPTFIEPPNNTFFNPMNMGYLNHPIMASADILQY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01744 157 MobiDBLite consensus disorder prediction 1 49 - -
Pste1g01744 157 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Pste1g01744 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pste1g01744 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pste1g01744 157 MobiDBLite consensus disorder prediction 24 49 - -
Pste1g01744 157 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Pste1g01744 157 FunFam BZIP transcription factor 28 79 - -
Pste1g01744 157 Coils Coil 46 73 - -
Pste1g01744 157 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Pste1g01744 157 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pste1g01744 157 MobiDBLite consensus disorder prediction 1 23 - -
Pste1g01744 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 155 - -
Pste1g01744 157 Gene3D - 28 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01744 Pste-Chr1 5356500 5356973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01744 24 157 bZIP Transcription Factor Family AT4G34590 57.143 4.77e-50 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste1g01744 bZIP_1 2.5e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01744 1 5356500 5356973 Pste1g01744 1 5356500 5356973 ECH