Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01728 GTGTCATACTCATACGATAATTGTGATGTGGGAGTAAATTGTAATTATGTGTTATTAGTGGTTGTTTAAAAAATGGAGTTGGTAGGAGGGTGGATCTACATCCACGGCTTCTGCACCAACTCAAGCTTGAACTTGAACAATGACAATGGGCGTGGGTCAATGATTGAATGGTAATTCTATTTTCATATGAAATTTCAAAAAAGCAAAAAAAAGAAAAGAAAGAGTTTTGATTGATTGATATAATATAAATATTGAGAAAACTGCCTGGCAAAGTGTGTCTCCTTAAAGATAAGAAGAGTAAGAGAAGAGGAGGCCAGAGTGTGGGTTTGAGTTTGGGGGGGCTCACTCTTTGTCTACACTTGCATCCCCAAAATGAGTGTCCTATGCATGCTACTTGTCCTTGTCCATTTGCAATTCTTGGAAACACATTCGGCGGCAATCTCAGAGTACCGGGCGCTTGTATCCATCCGTTCAGCGATTAGCGACGGGAACCCACCGGTGCTGGGTTCCTGGAACGCGTCGAGGCCGTACTGCACGTGGGTGGGCGTGAGGTGCGACAACCAGCGACACGTGACGGCGATCAACCTGACAGGACTGGACCTCTCAGGCAGCCTCTCGAGGGACGTGTCGCAGCTCCCATTCCTGACGAGCCTCTCCCTCGGCGCCAACAAATTGTCGGGGCCCATCCCTCCCTCCCTCTCCTCACTCTCCTCCCTCCGCTTCCTCAACCTCTCCAACAATGTCTTCAACCAAACCTTCCCCCCCCAACTCTCCCGCCTCCACAACCTCGAGGTCCTCGACCTCTACAACAACAACTTGTCCGGCCTCCTCCCTCTCGCCGTTGCCCAGATGCAGAACCTCCGCCACCTGCATCTCGGCGGCAACTTCTTCTCCGGCCAGATCCCCCCCGATTACGGTCGTTGGCCTCACCTCCAGTATCTCGCCCTCTCCGGCAACGAACTTGACGGCAAAATCCCGCCTCAACTCGGTTACCTCACCACCCTCCGGGAGCTCTACATCGGATATTACAACACCTATGTCGGCGGCATTCCGCCGGAGATCGGTAACCTCTCGGAGCTTGTCAGGCTCGACGCCGCGTATTGCGGGTTGTCCGGCGAGATTCCTGCTTCTCTGGGTAAGCTTCAGAAGCTGGACACACTGTTCCTTCAGGTGAATGCATTATCAGGGTCTCTTACTCCCGAGCTTGGGAACCTGAAGAATCTGAAATCGATGGATTTGTCTAACAACATGCTCTCCGGTGAGATTCCGGCTAGTTTTGTTGAGCTGAAGAGTATCACACTTTTGAACCTGTTCAGGAACAAGCTTCACGGAGCTATACCGGAGTTTATAGGGGAGCTTCCGGCGTTGGAAGTGGTGCAACTGTGGGAGAACAACTTCACAGGTAGCATTCCGGTGGGTTTGGGCAAGAATGGTAGACTCAACCTTGTTGATCTTTCTTCTAACAAACTAACCGGGACTTTGCCTCCTTATTTGTGTTCCGGGAATACTCTTCAGACTCTGATAACTCTCGGGAATTTCTTGTTCGGTCCAATTCCTGAATCGCTTGGGAGTTGTGAATCCCTTACCCGGATTCGAATGGGAGAGAACTTTTTGAATGGGTCCATTCCGAAAGGACTTTTTGGACTTCCCAAACTGACCCAAGTTGAGCTTCAGGATAATTATCTCTCTGGTGAGTTTCCTCAGGCTGCTTCTTTTGCTGTTAATCTCGGTCAGATTACTCTCTCCAACAATCAGCTTTCTGGGACATTGCCTCCTTCCATTGGTAACTTCTCCAGCATGCAGAAGCTCCTTCTGGATGGCAACATGTTCTCTGGTCGGATCCCTCCGCAGATTGGGATGCTGCAACAGCTATCCAAGATTGATTTTAGTGGCAACAAGTTTTCGGGTCCTATTTCCCCCGAGATCAGTCAGTGTAAGCTGTTAACTTTCCTTGACCTTAGCCGCAATGAGCTCACTGGAGAGATCCCTAATGAGATAACTGGCATGAGGATATTGAATTACCTTAACCTTTCAAAGAATCATTTGGTGGGTAGCATTCCCTCCTCCATATCATCAATGCAAAGCTTGACTTCTGTTGATTTTTCATACAACAAACTGTCTGGCTTGGTGCCTGGTACTGGTCAGTTCAGCTACTTCAACTACACGTCTTTCTTGGGAAACCCTGACCTGTGTGGCCCCTATTTGGGTGCTTGCAAGGATGGGGTTGCCGACGGTGCACACAGACCTCATGTAAAAGGACTCTCTTCTTCTTTGAAGCTGCTACTTGTTGTTGGGTTGCTTTTATGTTCCATTGCTTTTGCTGTGGCAGCCATATTCAAGGCTCGGTCACTAAAGAAGGCAAGTGAGGCTCGTGCATGGAAGTTGACTGCGTTCCAGCGTTTGGACTTCACTGTTGATGATGTTTTGCATTGCTTGAAGGAAGATAACATCATAGGGAAAGGAGGTGCTGGCATTGTCTACAAGGGGTCAATGCCTAATGGAGATCAGGTTGCTGCGAAAAGGCTTCCAGCTATGAGTAGAGGCTCTTCACATGATCATGGTTTCAATGCAGAGATTCAAACATTGGGGCGAATCCGACACAGGCACATTGTTAGATTGTTGGGTTTCTGTTCAAATCATGAGACAAACCTTTTGGTCTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGAAAGAAAGGGGGTCATTTGCATTGGGACACAAGGTATAAGATTGCGGTTGAGGCTGCCAAGGGGCTTTGCTATCTGCACCATGATTGCTCTCCGCTCATTGTCCATCGTGATGTGAAGTCCAACAACATCCTTCTTGATTCTAATCACGAAGCCCATGTTGCTGATTTTGGGCTTGCCAAGTTCCTGCAAGATTCTGGGACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACATTGAAAGTTGATGAAAAAAGCGATGTATATAGTTTCGGTGTGGTTCTTTTAGAACTTATAACAGGCAGGAAACCAGTTGGAGAATTTGGTGATGGCGTGGACATTGTGCAATGGGTCAGAAAAATGACAGACTCTAACAAGGAAGGAGTTCTTAAAGTTCTTGATCCAAGGCTTCCCTCAGTTCCCCTTCACGAAGTGATGCATGTTTTCTATGTAGCCATGCTGTGTGTTGAAGAACAGGCTGTAGAGAGACCAACTATGCGTGAAGTTGTTCAAATACTGACAGAGCTTCCAAAGGCACCTGGCTCTAAACAGGGGGAGTTAACAATAACAGAATCCTCTTTGTCATCATCAAATGCTTTAGAATCTCCTTCCACAGTCTCTAAAGATCAGCTAAATCCTCCTCAATCCCCACCACCCGATCTTCTTAGCATATAAATGCCCTGTTGGGTGTTTCCTTTTAGTTCTCTTTTGTTTGTAATAACCTATCCATTTACTTTCTTTTTTCTGTCTATCTTTTGGGATTGGGGTTTTTTTTCTAACTGAAGGTGTTGATCTTTGGATTTTTTAATGGTTTTGTACAGTAGGATTGGTGGGGGTATTTTCTTATAAAATCACCGCCTTTATCATGTAGTACTGCTTTTAATTTTTATGTCACGGCCACAGTGGACTAGTGGTGCTCTGCCTACGCTGGGAGTGGGGAGGGTTTTTGAACTGTATCAATGACAGGTGGAGTGAAAGGGACACACCATGACTCAAAATGAGTTGGGTATGAAACAATGGGTACATACTATATTTGTATGGTTTAGAAAATTATTGATGAATCCTGAGTGGATTGTCACAGTATGAACTATGAACTGTGAGCCTGAGCTGTGACAGTTAGCCGCGAGATTATCAGTCAGATTTTGATTAGCTTATTTTAAGAAGTTAACTTGTTTCACAAAAATGGGATTGAATCAAGCCTGTTTAAGCATT 3942 0.4627 MSVLCMLLVLVHLQFLETHSAAISEYRALVSIRSAISDGNPPVLGSWNASRPYCTWVGVRCDNQRHVTAINLTGLDLSGSLSRDVSQLPFLTSLSLGANKLSGPIPPSLSSLSSLRFLNLSNNVFNQTFPPQLSRLHNLEVLDLYNNNLSGLLPLAVAQMQNLRHLHLGGNFFSGQIPPDYGRWPHLQYLALSGNELDGKIPPQLGYLTTLRELYIGYYNTYVGGIPPEIGNLSELVRLDAAYCGLSGEIPASLGKLQKLDTLFLQVNALSGSLTPELGNLKNLKSMDLSNNMLSGEIPASFVELKSITLLNLFRNKLHGAIPEFIGELPALEVVQLWENNFTGSIPVGLGKNGRLNLVDLSSNKLTGTLPPYLCSGNTLQTLITLGNFLFGPIPESLGSCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGEFPQAASFAVNLGQITLSNNQLSGTLPPSIGNFSSMQKLLLDGNMFSGRIPPQIGMLQQLSKIDFSGNKFSGPISPEISQCKLLTFLDLSRNELTGEIPNEITGMRILNYLNLSKNHLVGSIPSSISSMQSLTSVDFSYNKLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVADGAHRPHVKGLSSSLKLLLVVGLLLCSIAFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLHCLKEDNIIGKGGAGIVYKGSMPNGDQVAAKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKAPGSKQGELTITESSLSSSNALESPSTVSKDQLNPPQSPPPDLLSI 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01728 1010 Gene3D Ribonuclease Inhibitor 23 214 IPR032675 -
Pste1g01728 1010 Gene3D Ribonuclease Inhibitor 491 614 IPR032675 -
Pste1g01728 1010 SMART LRR_typ_2 281 305 IPR003591 -
Pste1g01728 1010 SMART LRR_typ_2 329 353 IPR003591 -
Pste1g01728 1010 SMART LRR_typ_2 569 592 IPR003591 -
Pste1g01728 1010 SMART LRR_typ_2 88 112 IPR003591 -
Pste1g01728 1010 SMART LRR_typ_2 160 184 IPR003591 -
Pste1g01728 1010 SMART LRR_typ_2 136 159 IPR003591 -
Pste1g01728 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 657 765 - -
Pste1g01728 1010 Gene3D Transferase(Phosphotransferase) domain 1 766 978 - -
Pste1g01728 1010 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Pste1g01728 1010 Gene3D Ribonuclease Inhibitor 377 490 IPR032675 -
Pste1g01728 1010 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 162 954 - -
Pste1g01728 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 766 976 - -
Pste1g01728 1010 Pfam Protein tyrosine and serine/threonine kinase 690 959 IPR001245 GO:0004672|GO:0006468
Pste1g01728 1010 SMART serkin_6 688 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01728 1010 SUPERFAMILY L domain-like 355 611 - -
Pste1g01728 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Pste1g01728 1010 Gene3D Phosphorylase Kinase; domain 1 654 765 - -
Pste1g01728 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Pste1g01728 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Pste1g01728 1010 SUPERFAMILY RNI-like 70 391 - -
Pste1g01728 1010 Gene3D Ribonuclease Inhibitor 215 376 IPR032675 -
Pste1g01728 1010 Pfam Leucine Rich Repeat 162 179 IPR001611 GO:0005515
Pste1g01728 1010 Pfam Leucine Rich Repeat 283 304 IPR001611 GO:0005515
Pste1g01728 1010 Pfam Leucine Rich Repeat 138 155 IPR001611 GO:0005515
Pste1g01728 1010 MobiDBLite consensus disorder prediction 971 997 - -
Pste1g01728 1010 ProSiteProfiles Leucine-rich repeat profile. 138 159 IPR001611 GO:0005515
Pste1g01728 1010 MobiDBLite consensus disorder prediction 966 1010 - -
Pste1g01728 1010 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01728 1010 SUPERFAMILY Protein kinase-like (PK-like) 684 959 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01728 Pste-Chr1 5304891 5309356 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01728 12 989 Receptor kinase-like Gene Family AT5G65700 79.129 0.0 1564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g01728 PK_Tyr_Ser-Thr 5.1e-46 CL0016