Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01724 GGCAAAACGAAAAAAATGCATTGGGAATTAGGCAAATGGCAAAGGTATACGAGAGAATACAAGGTATTAATAATATTTGTTGGCTTGATATGGATTGGCGTGGCAGAGTGTTCTTCATTCAGTGACATGGAGGCGCTGCTGAAGCTGAAGGAGTCGATGAAGGGAGAGAAAGCCAAAGACGATGCCCTGGATGACTGGAAGTTTTCGGCGTCGCTTTCGGCGCACTGTTCATTTTCAGGGGTAAAATGCGACGAAGAGCTTCGTGTCGTTTCTATCAACGTGTCCCTCATTCCTCTATTCGGTGACGTACCTGAGGAGATAGGAGTGTTGGACAAACTGGAAAACCTGACACTGACGCAGAACAACCTCACCGGCCAACTTCCCAAGGAGATCTCGGGCCTCAGTTCCCTCAAGTTCCTCAACATCTCCCACAACCTCTTCTCCTCGTATTTCCCCGCCCTTCAGATGATGACGCAACTCCAGTACCTCGACGCCTACGACAACAACTTCACTGGACCGCTTCCCCAAGAGTTGGTCAAACTTGACCAACTCAGATACCTCAAGCTCGACGGTAACTATTTCTCCGGCCCCATACCCGACACTTACTCCCACTTCAAGAGCTTGGAGTATCTCAGCTTAGGCACCAATTGCTTATCCGGTAAGATTCCCCACACCTTGTCTCGCCTCAAGACTCTCACCTACCTTAAACTCGGTTACAACAACGCTTACGAAGGCGGTATCCCCCCTGAGTTCGGCTCCATGACATCTCTTAAATATCTTGATCTCTCTAGCTGCAACCTCAGCGGCCATATTCCTCCTAGTCTGAGCAATTTGACCAACCTTGACACGTTGTTCTTGCAAATCAACAACCTCACCGGAACCATTCCCTCGGAACTGTCTGCTATGATGAGCCTCATGTCACTGGATCTCTCCTTAAACTCCCTCACCGGTGAGATTCCCGAGAGCTTCTCGCAGCTCAAAAACCTCACTCTCATGAACTTCTTCCGCAACAAGCTTAGAGGCCCTGTTCCCTCCTTCGTTGGCGAGCTTCCCAATCTAGAAACACTGCAGCTGTGGGAGAACAACTTTTCCTTCGTGCTCCCTCAAAACCTTGGACAAAACGGGAGGTTGAAGTTCTTCGACGTCACCAACAATCACTTCACGGGCTTCATCCCTCCAGATTTGTGCAAGAGTGGGACGTTACAGACCTTCCTCATCACCGATAACTTCTTCCACGGTCCAATCCCCTCAGGGATTGGTAACTGCAAGTCCCTCCTCAAGATCCGCGCCTCTAACAACTTCCTTAACGGCCCCGTTCCGTCTGGGATTTTCCAACTACCTTCCGTGATCATCATCGAGCTCGCCAATAACGCTTTTAACGGCCAACTCCCTTCCCAGATTTCGGGAGATGCTCTCGAGATTCTGACTCTTTCCAAAAACTCATTCACCGGGACAATTCCCCCTGCGCTGAAGAACTTGAGGGCGCTCAAGAATCTGTTACTTGACGCCAACCAGTTCGTTGGGGAAATCCCAGGGGAGGTTTTCGACTTACCCATGTTGACCACGGTCAACATAAGCGGCAACAATCTCACGGGACCAATCCCGACTACCTTCACTCGGTGCGTTTCACTCACTGCCGTTGACCTCAGCCGGAACATGCTTCTCGGCGAGATTCCCAGGGGGATAAAAAACATCACGGACTTGAGCATTCTGAATGTATCCAGAAACCTTATAACAGGGCCAGTCCCTGACGAGATCCAGTTCATGACGAGTCTGACCACGCTCGACCTGTCCTACAACAATTTCCTCGGCAAGTTGCCAAGCGGGGGTCAGTTCTTTGTCTTCAGCGAGAAGTCCTTTGCCGGGAACCCCAACCTCTGCACCCCCTACTATTGCCCTAATGGGTCGTTGAAAAAGAGGCGCGGTGCTTGGAGTTCCAAGTCCACCAGGGTGATAGTCATGGTGATTGCAGTCGCCACCCTGGCGCTGCTGCTGGTAGTCACGCTCTACATCATCAGGAGGAGGAAGCTGCACCGGGCCATGACCTGGAAACTGACGGCATTTCAGCGGCTCAACCTCAAGCCAGAGCACGTCGTCGACTGTCTCAAGGAGGAGAACATAATAGGTAAGGGAGGAGCCGGAATCGTCTACCGCGGGTCCATGGCAAACGGGACTGAGGTCGCAATAAAGCGGTTGGTTGGAGCCGGTAGTGGGAGGAACGATTACGGCTTCAAAGCAGAGATAGAGACGCTGGGAAAGATAAGGCACAGGAACATAATGAGGCTTCTGGGTTACGTCTCCAACAAGGAGACCAACTTGCTGCTTTATGAGTACATGCCCAATGGGAGTTTAGGGGAGTGGTTGCATGGGGCTAAAGGAGGGCACTTGAGCTGGGACATCAGGTACAAAATTGCAGTCGAAGCTGCAAAGGGTCTCTGTTATTTGCACCATGATTGTTCCCCTCTTATCATACACAGGGATGTCAAGTCCAATAATATATTGCTCGATGCTGACTTGGAGGCCCACGTTGCCGATTTTGGTCTTGCCAAGTTCTTGTACGACCCTGGCGCCTCTCAGTCCATGTCCTCCATTGCTGGCTCCTACGGCTACATTGCTCCAGAGTATGCATACACCTTGAAAGTGGACGAGAAGAGTGATGTGTACAGCTTTGGCGTCGTGCTGTTGGAACTGATAATTGGGAGGAAGCCCGTGGGTGAGTTTGGGGATGGGGTGGACATCGTTGGATGGGTAAATAAAACAATATTGGAACTCTCTCAGCCGTCCGATGCGGCATTGGTACTGGCAGTGGTGGACCCTCGCCTTAGTGGCTATCCATTGACAAGTGTCATTTACATGTTCAACATAGCTATGATGTGTGTTAAAGAAATGGGGCCCGCTAGGCCTACCATGAGGGAAGTCGTTCATATGCTCACTAATCCTCCTCACTCGGCCACTCCCAACCTAATTAATCTCTAG 2976 0.5087 MHWELGKWQRYTREYKVLIIFVGLIWIGVAECSSFSDMEALLKLKESMKGEKAKDDALDDWKFSASLSAHCSFSGVKCDEELRVVSINVSLIPLFGDVPEEIGVLDKLENLTLTQNNLTGQLPKEISGLSSLKFLNISHNLFSSYFPALQMMTQLQYLDAYDNNFTGPLPQELVKLDQLRYLKLDGNYFSGPIPDTYSHFKSLEYLSLGTNCLSGKIPHTLSRLKTLTYLKLGYNNAYEGGIPPEFGSMTSLKYLDLSSCNLSGHIPPSLSNLTNLDTLFLQINNLTGTIPSELSAMMSLMSLDLSLNSLTGEIPESFSQLKNLTLMNFFRNKLRGPVPSFVGELPNLETLQLWENNFSFVLPQNLGQNGRLKFFDVTNNHFTGFIPPDLCKSGTLQTFLITDNFFHGPIPSGIGNCKSLLKIRASNNFLNGPVPSGIFQLPSVIIIELANNAFNGQLPSQISGDALEILTLSKNSFTGTIPPALKNLRALKNLLLDANQFVGEIPGEVFDLPMLTTVNISGNNLTGPIPTTFTRCVSLTAVDLSRNMLLGEIPRGIKNITDLSILNVSRNLITGPVPDEIQFMTSLTTLDLSYNNFLGKLPSGGQFFVFSEKSFAGNPNLCTPYYCPNGSLKKRRGAWSSKSTRVIVMVIAVATLALLLVVTLYIIRRRKLHRAMTWKLTAFQRLNLKPEHVVDCLKEENIIGKGGAGIVYRGSMANGTEVAIKRLVGAGSGRNDYGFKAEIETLGKIRHRNIMRLLGYVSNKETNLLLYEYMPNGSLGEWLHGAKGGHLSWDIRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADLEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTILELSQPSDAALVLAVVDPRLSGYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLTNPPHSATPNLINL 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01724 986 FunFam Leucine-rich repeat receptor-like protein kinase 196 288 - -
Pste1g01724 986 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 774 985 - -
Pste1g01724 986 SMART serkin_6 697 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01724 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 245 973 - -
Pste1g01724 986 SUPERFAMILY RNI-like 87 407 - -
Pste1g01724 986 Pfam Leucine Rich Repeat 251 273 IPR001611 GO:0005515
Pste1g01724 986 Pfam Leucine rich repeat 490 549 IPR001611 GO:0005515
Pste1g01724 986 FunFam Leucine-rich repeat receptor-like protein kinase 34 195 - -
Pste1g01724 986 SUPERFAMILY Protein kinase-like (PK-like) 682 972 IPR011009 -
Pste1g01724 986 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 667 773 - -
Pste1g01724 986 SUPERFAMILY L domain-like 328 627 - -
Pste1g01724 986 Gene3D Transferase(Phosphotransferase) domain 1 774 981 - -
Pste1g01724 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Pste1g01724 986 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Pste1g01724 986 ProSiteProfiles Protein kinase domain profile. 697 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01724 986 Gene3D Ribonuclease Inhibitor 238 340 IPR032675 -
Pste1g01724 986 Gene3D Ribonuclease Inhibitor 150 237 IPR032675 -
Pste1g01724 986 FunFam Leucine-rich repeat receptor-like protein kinase TDR 318 629 - -
Pste1g01724 986 SMART LRR_typ_2 200 224 IPR003591 -
Pste1g01724 986 SMART LRR_typ_2 584 607 IPR003591 -
Pste1g01724 986 SMART LRR_typ_2 249 272 IPR003591 -
Pste1g01724 986 SMART LRR_typ_2 273 297 IPR003591 -
Pste1g01724 986 SMART LRR_typ_2 488 512 IPR003591 -
Pste1g01724 986 SMART LRR_typ_2 345 369 IPR003591 -
Pste1g01724 986 SMART LRR_typ_2 105 129 IPR003591 -
Pste1g01724 986 Gene3D Ribonuclease Inhibitor 36 149 IPR032675 -
Pste1g01724 986 Pfam Leucine Rich repeat 585 598 IPR001611 GO:0005515
Pste1g01724 986 Gene3D Ribonuclease Inhibitor 341 635 IPR032675 -
Pste1g01724 986 Gene3D Phosphorylase Kinase; domain 1 670 773 - -
Pste1g01724 986 Pfam Protein tyrosine and serine/threonine kinase 698 971 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01724 Pste-Chr1 5295073 5298135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01724 32 984 Receptor kinase-like Gene Family AT1G75820 60.833 0.0 1179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g01724 PK_Tyr_Ser-Thr 2.3e-41 CL0016