Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01719 ATGGTTCTAAGCAAGCTAGGTGTACATGCTGATCATTTCAAATCTGACAAGGGCTTAACAAACCTGAAGCCATCTTCCTCTCAGCACCAGGATGGCAGAGGAACTGATTATACGAAAAAAATGAAGTCAAGGTCATTTCAGCTTTCTGATTTTGAGCCTCCTCAATCACTACCTTCGGTCAGGAGCTTAACCCGACCAAGAAAGTCACCATCTCTTCATGTTCCAAGAATTGCAGCATCCCCACAACAGCAGAAGCCTTTGGTTAGAAGATCACCCAATTATATGAAGCCTACCAGCAGTTCAGATGCAAAAAAGGAGCTTTTGCCGGTTAATCTTCACAATACTCAATCCAGTTCAGATGGTAAGAGTCTACCACAAAAATGTATGAGAAATTCAAAAACTATCTTTGTTTCTTGCAAAGAACCTGCAAAAACTTTGTCAAGATCATCTAGTTTGAATTCAATGAGAGCATTAGCAAAGACTCCTAGTGTTAAGCCTTGTAAAGCTTGTTCGAGAAAATTCACATCAGCAGTTCTGTTTGAAGATGTGAATGCACCAGAGAGGGCTACCTGCTCTTCAATTTTGAAAGATTTTAAGTTCCCTGAGTACCTCGTGCTTAACCCCGGGGGAACTGAGTCTGAGGGAGTTTCAGTGATGAAGGTTTGCCCCTATACATATTGTTCTCTTAATGGCCATGGTCATGCTCCTTTGCCTTCATTGAAGAGCTTCATGTCAGAAAGGAGGCATTCTTTGGAGACTCAGAATATAAAGTCAGAAGCTGTAAGCCTTCAAAGATGGAAGGTGCCCCCCAATGATACAATAAAAGATTCTGACATTGAGCAGATTGTCTTTCATGGAAAACCCGCATGTGATGAAGCTGATATGGATAATCCAACAATCACTCCCTTGGCACAAGAAATTGGTATAGATTTCTTTTTTGAAATCTATGCTAAAGACAGGGAAGGAGCTGATGAAATGGAAAGATTCAACCCTGTCAAAGACCATGAGGAACTACAAGATATCAATTTAGCAAATGAGGAGAATGGCATTGCAGCAGAGGAGGATGGCGTCAAGCAAGTTACTCCAGGTGTGATTTATGATCTTCCAAAGTCACACATCAATTTCAATGAGGATTTCAAAAACTACTTTGCTGAAGCTGCTGCAATTGAAGCAGATAGCAAAAGGAGCTTTAATATAGGACAAAATGCTGAAGATGTAGATGAAAACTACTCACGTAACTGGTTTCATGAAGAATCGTGTACAGGAACCTACTACAATGAGGCTAGCTATGATGGGGAACATAAGGAGAATATTGAGATAGATGAGTTCGATTCTCAATATAGTGATACAGACTGGGAGGAGGAACACCTCCGTGAATTCAACTATCAAGACGATACTGATTCTTTCATCTGTTCAGTGGAGGAGACCAACTCAAAACTTGAGTCCTTTTCAGAGAGTTCAAATGATATATCTGAAATGTGGTTAGATGACATGTTTAGCAGCCATTATGCAGGCATTCAAGAAGCCTTAGAAGAGAAAAGCACCTGGTTTGAAGCACAACCTTGTTGCGCTAATTCTGTCCTGGAAGACACAGGTGAAAGCATTAAGTTTGTGACTCAAGAAACAGATTATCTATCCAATTGTATAAGTTCAGAGCATGATCAATCTACTTTGACTGAGGAAGTATTTCAGCATCTGACAAATGCAGAAGATAACAGAGAAAATGAAAAACAAATGAGTTATGAGGTCGGTAGTATCTCAATGGTAGAAGATGAGGAGACGATTGAAAATAGTGAAGGCCACAAGACTAGTGAAAGTAGGGAACTTGACCAGAGCTGTGAAGGAAAATTTACAAGCCTGGACAATGATGATGCTGATGGAGTTAATCAGGAGAACCAAACTCAGTCGTCTGAAGAAACTGAAGAAAGTACCGCTATTCAGGAGCAGAAATTATTGGAGGAAAATCAAGTTAAAGTTGACAGTAGTAAGGTTCAGAGCACAGGTGGTGTAGGGCAGCACACAAGCAAGAATTATCAGTGGGGAATTAAGCGCAAGAGAGCTGTGGAAGAGGAGGAAGAAATGAGAAAGATCAATCCACGAAAGCCAAATTTCCTGCCCTTGGTTTCTGAGTATGAAGCAGAGAAAGTTGACCTTAAGCACCAAATGATAGATGAAAGAAAAAATGCAGAGGAATGGATGCTTGATTTCGCACTCAGACAAGCTGTCACGAGACTTGCTCCTGCAGGGGAAAGGAAGGTGTCATTGCTGGTTGAAGCTTTTGAAACAGTAATGTCAATGCCCAAATGCGAAGCCCATGTGAGAAATGATTCACCCTTTGCTCATGCAAGACCTATTCAAGCATGTAGCTGA 2370 0.4093 MVLSKLGVHADHFKSDKGLTNLKPSSSQHQDGRGTDYTKKMKSRSFQLSDFEPPQSLPSVRSLTRPRKSPSLHVPRIAASPQQQKPLVRRSPNYMKPTSSSDAKKELLPVNLHNTQSSSDGKSLPQKCMRNSKTIFVSCKEPAKTLSRSSSLNSMRALAKTPSVKPCKACSRKFTSAVLFEDVNAPERATCSSILKDFKFPEYLVLNPGGTESEGVSVMKVCPYTYCSLNGHGHAPLPSLKSFMSERRHSLETQNIKSEAVSLQRWKVPPNDTIKDSDIEQIVFHGKPACDEADMDNPTITPLAQEIGIDFFFEIYAKDREGADEMERFNPVKDHEELQDINLANEENGIAAEEDGVKQVTPGVIYDLPKSHINFNEDFKNYFAEAAAIEADSKRSFNIGQNAEDVDENYSRNWFHEESCTGTYYNEASYDGEHKENIEIDEFDSQYSDTDWEEEHLREFNYQDDTDSFICSVEETNSKLESFSESSNDISEMWLDDMFSSHYAGIQEALEEKSTWFEAQPCCANSVLEDTGESIKFVTQETDYLSNCISSEHDQSTLTEEVFQHLTNAEDNRENEKQMSYEVGSISMVEDEETIENSEGHKTSESRELDQSCEGKFTSLDNDDADGVNQENQTQSSEETEESTAIQEQKLLEENQVKVDSSKVQSTGGVGQHTSKNYQWGIKRKRAVEEEEEMRKINPRKPNFLPLVSEYEAEKVDLKHQMIDERKNAEEWMLDFALRQAVTRLAPAGERKVSLLVEAFETVMSMPKCEAHVRNDSPFAHARPIQACS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01719 789 MobiDBLite consensus disorder prediction 569 677 - -
Pste1g01719 789 MobiDBLite consensus disorder prediction 622 642 - -
Pste1g01719 789 MobiDBLite consensus disorder prediction 47 66 - -
Pste1g01719 789 Pfam Plant calmodulin-binding domain 682 765 IPR012417 GO:0005516
Pste1g01719 789 MobiDBLite consensus disorder prediction 658 677 - -
Pste1g01719 789 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 765 IPR044681 GO:0005516
Pste1g01719 789 MobiDBLite consensus disorder prediction 84 100 - -
Pste1g01719 789 MobiDBLite consensus disorder prediction 1 103 - -
Pste1g01719 789 Coils Coil 708 728 - -
Pste1g01719 789 SMART CaM_binding_2 653 765 IPR012417 GO:0005516
Pste1g01719 789 MobiDBLite consensus disorder prediction 594 621 - -
Pste1g01719 789 MobiDBLite consensus disorder prediction 643 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01719 Pste-Chr1 5279769 5282138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01719 623 789 Calmodulin-binding Proteins AT2G38800 41.765 4.62e-29 121