Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01716 ATGCCCCTATATAAAACGTCCCAACATTGTTCCTCTCGTCTCCCACCCAAGTTTGCACAATTAATCTATTCTTTTCCATCATCCTCCTCTCGCTCTTCTGATTTTCCTGTCAAGATGATGGAAATTGCGTCCAACAACTACTTGCCTGTACTTGGACTTGAGGATCCGACCTTTTTTGATCAATACCCCATGGATTCATTTGCATGTCCACTCGATGACTTTGCCTTTGACTCTTTCTCCGGGTCCCCAGAGAGTAATTCCCCTTATCAGTTTAACTCCAACTCCGATAGCACACCAAATTGTTTCCCAGCTGAAAGTCCTGAACAGTCTTTTACTGCTGCAAAACCAACCAAAAGGTTCAAGATCAACACTTGTACCAGTGATTTAATTTCCCACAAGCTGTCTGCTTCTCCATCTTCCCAACTTATATCTTTTGGAAACTTTAATGCCTCATCAACTGCCCCCCAGCAATTTCACAACCTGGACTCCGACGTGAAACCTAAAATCGAGAACGCGTGTTGTGAGAACATGGATTTTGCGGCCTTTGTTTCTCAAGGATCATATGAGGACAAAAGTTTCCTAAGTTCTGATAATAGAACGAACCAGGTTGGCATGACCACTAGGAACCCAATCCAAGCTCAAGAGCACGTGCTAGCTGAAAGAAAACGAAGGGAGAAGCTCAGTCAGAGATTCATTGCACTTTCCGCCGTCCTCCCTGGCCTTAAGAAGGTACTCTCAGCTAAGCTTAACTATTGCTTCTTTCTTTTTATCCGTAAAAAATTCTAG 786 0.4351 MPLYKTSQHCSSRLPPKFAQLIYSFPSSSSRSSDFPVKMMEIASNNYLPVLGLEDPTFFDQYPMDSFACPLDDFAFDSFSGSPESNSPYQFNSNSDSTPNCFPAESPEQSFTAAKPTKRFKINTCTSDLISHKLSASPSSQLISFGNFNASSTAPQQFHNLDSDVKPKIENACCENMDFAAFVSQGSYEDKSFLSSDNRTNQVGMTTRNPIQAQEHVLAERKRREKLSQRFIALSAVLPGLKKVLSAKLNYCFFLFIRKKF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01716 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 213 243 IPR036638 GO:0046983
Pste1g01716 261 Gene3D - 205 256 IPR036638 GO:0046983
Pste1g01716 261 PANTHER BHLH TRANSCRIPTION FACTOR 62 244 - -
Pste1g01716 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 211 261 IPR011598 GO:0046983
Pste1g01716 261 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01716 Pste-Chr1 5277022 5278156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01716 207 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 81.081 1.57e-13 67.0