Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01712 TTGGAGAAGAGATTAGAGAGAGAGAGAGAGAGAGAGTGGGAAGGAAGAAGGAAGAAGGAAGAAGGAAGTGTGTCTGAGATCGATCGATCGATCATTGGCTCGATCATCTGTCTTGGATTCCGCAGCAGATAGAGAGAATGGGAGAGGTGGCGCGTGGAGGCTGTTGCCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATTCCCATCGAATCCGCTCACAGCACTGTCTCCTACCTTGGCGACCTTGGCCTCCTTCAGTTCAAGGATCTCAATGCAGATAAGAGTCCTTTTCAACGGACCTATGCAACTCAGATTAAAAGATGTGGAGAGATGGCTCGGAGATTACGTTTTTTCAAGGAGCAAATGTTGAAGGCTGGTGTTTCACCAAAATATTCCACCACACCAGTTGATGTGAACATAGATGACCTTGAGGTAAAACTTACAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGGTCATACAACGAGCTTGTGGAGTATAAGCTTGTTCTGCTTAAGGCTGGTGAGTTTTTCCACTCAGCTCAAAGCCGAGCTATAGAGCAGCAGAGAGAATACGAATCATGTCGTCTGAGTGGTGAATCTATTGAAACACCTTTATTACAGGACCAAGAATTGTCAGGTGATTCGTCAAAGCAAGTTAAGTTGGGGTTTTTAGCTGGTCTTGTTCCAAGGGAAAAGTCCATGGTATTTGAGAGAATTTTATTTCGTGCTACTAGAGGAAATGTATTTTTCAGGCAGGCTACTGTTGAGGATCTTGTCACAGATCCTGTTTCTGGGGAAAAGACTGAGAAAAATGTTTTTGTGGTCTTCTATGCCGGGGAAAAAGCAAAAGCCAAGATTCTGAAAATATGTGAAGCCTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGAAAACAAGCTCAACTGATTACAGAGGAGAGGATTGACTCAGTTGCTAAGTTTTTCTTAGATGTCTCCTGTAACCACCAGGCATTGATTGCATCAGTCCTTTTAATGTGTAACAATAACATAGCTAAGGTTTCTGGAAGACTTTTAGAATTGAAGACCACTATAGATGCTGGAATACTGCACCGGGATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAATGGGATATTTTGGTGAAGAAGGAGAAATCTATCCATCATACGCTGAACATGCTGAGCCTTGATGTGACAAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCAACTAAGGAGATCCAGGAAGCATTACAGCAGGCAGCATTGGACTCTAATTCTCAAGTCAATGCCATTTTCCAAGTTTTGCATACCAGGGAGTTGCCACCTACATACTTTCGCACAAACAAATTTACTTCTTCTTTTCAAGGAATTATTGATTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCTACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCCGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATTACAGATATGACTTTTGGAGGTCGTTATGTCATTTTGTTGATGGCGTTTTTCTCAATCTACACTGGCATTATCTATAATGAGTTCTTTTCTGTCCCATTTGCAATCTTTTCCCCCTCTGCATATGGATGTCGTGATGTTTCTTGCAGGGATGCTACAACAGTGGGCCTCATAAAAGTACGTGACACTTACCCTTTCGGAGTGGATCCTGTGTGGCATGGTACACGAAGTGAACTACCATTCCTGAACTCATTGAAAATGAAAATGTCTATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTGTGATGAGCTATTTCAATGCCATATTCTTCAGAAACAGCGTAAATGTGTGGTTCCAGTTCATTCCCCAGATTATATTTCTCAACAGTCTATTTGGCTACCTATCCCTTCTTATTATTGTCAAGTGGTGCACTGGTTCTCAAGCTGATTTATACCATATTATGATCTACATGTTCCTCAGCCCGACAGATGATTTGGGTGAGAACCAACTCTTTGTTGGTCAGAAAAATTTGCAGCTTGTGCTTTTACTTCTGGCTGTTGTCTCCGTCCCCTGGATGCTTTTACCAAAACCTTTTATTTTGAAGAAGCAACATGAAGCTAGACACGGGGCTGAATCCTATACACCACTTCAAAACACAGATGAGAGCTTGCAAGTGGAGTCAAACCATGATTCCCATGGTCATGAGGAATTTGAGTTTAGTGAAGTCTTTGTACATCAACTCATACATACCATAGAGTTTGTACTTGGAGCAGTCTCCAATACAGCTTCTTACCTCCGTCTATGGGCCCTGAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGATGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTTGGTCTCATTGTCTTCATCTTCGCTACTGTGGGAGTGTTACTCGTCATGGAAACTCTGAGTGCCTTCTTGCATGCGTTACGTCTTCACTGGGTGGAGTTTCAAAACAAGTTTTATGAGGGTGATGGTTACAAGTTCCACCCTTTCTCGTTCTCATTGCAGGATGATGAGGAATGATATGCTCTTAAATAGCATTAATAAGAACGAGGAGTTATATATATAGCTTTGGAGTTGGTTGTATTGATTCTTTCATTTGATGTAACTAGTCGGTGATTGGTATCTGCGGCATTGTATGCGGTAGAATCCTTGGAGCTTTTTCATCAAACGTGCCGTTATGTTTATTTATCCATTGAGGGAATAAATATTCCAAATTAGGGGGGTGACTTTGTATGAGCTAGGCAGGCGTGGCCAGTGTAATAATTATAACTTGGAAGATGAACTTAATGTTCATATCTTTATTTGTTTTGATTAAAAAAATCCTTCTATTGATGTCTTAGTTTGCATGATGATGGAAATAATTT 3040 0.4128 MGEVARGGCCPPMDLFRSEPMQLVQLIIPIESAHSTVSYLGDLGLLQFKDLNADKSPFQRTYATQIKRCGEMARRLRFFKEQMLKAGVSPKYSTTPVDVNIDDLEVKLTEIESELTEMNANGEKLQRSYNELVEYKLVLLKAGEFFHSAQSRAIEQQREYESCRLSGESIETPLLQDQELSGDSSKQVKLGFLAGLVPREKSMVFERILFRATRGNVFFRQATVEDLVTDPVSGEKTEKNVFVVFYAGEKAKAKILKICEAFGANRYPFAEELGKQAQLITEERIDSVAKFFLDVSCNHQALIASVLLMCNNNIAKVSGRLLELKTTIDAGILHRDNLLNTIGAQFEQWDILVKKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATKEIQEALQQAALDSNSQVNAIFQVLHTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITDMTFGGRYVILLMAFFSIYTGIIYNEFFSVPFAIFSPSAYGCRDVSCRDATTVGLIKVRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVMSYFNAIFFRNSVNVWFQFIPQIIFLNSLFGYLSLLIIVKWCTGSQADLYHIMIYMFLSPTDDLGENQLFVGQKNLQLVLLLLAVVSVPWMLLPKPFILKKQHEARHGAESYTPLQNTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLQDDEE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01712 852 Pfam V-type ATPase 116kDa subunit family 39 282 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pste1g01712 852 Pfam V-type ATPase 116kDa subunit family 311 845 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pste1g01712 852 Coils Coil 101 128 - -
Pste1g01712 852 PANTHER VACUOLAR PROTON ATPASES 15 848 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pste1g01712 852 PIRSF ATP6V0A1 11 852 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01712 Pste-Chr1 5261881 5274365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01712 13 852 Primary Pumps ATPases(2) AT4G39080 74.584 0.0 1285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01712 1 5261881 5274365 Pste1g01712 1 5261881 5274365 ECH