Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01706 ACAAATTTAAAAGACATCGATGGACGCATCATCAGAAGACAGCTGGTTATCGAATTTGGTGAACAAATTAATTGGCTTTATCATCATTATTGTTTTTCTGTCGATGATTACCGTTTCTATATTTTATTTCAGCTGTTGCAAGAAGAGGAGGACATCAACCTGTTCTCACAATGTCACCTGGAGTTGCTTGACGAGGATGAGGATTTACTCTGGCCTCAGATACCAAGTGCCCTGCACCAACCTTTCTCTTCCCAGACTCACACTCTTGTGGACGAAACCTCTTTGGAGAGGCCCACCAAGCGGCCCAAAACGAGTTTGATCTTCAACTCATCCACCACTACTCACTTTTCGCCATCTTCCTCTTCTTCTCCAACCTCCCACTTTCACGGGATTGTTTCACAAACCCCCAATGGATCATCAGAAACTGAACGCCCCAAAGGCCCAGCAAGCTACAAGTCCCCTGCTCAGGTTCAGGATCACATCATCGCTGAGAGAAAACGAAGAGAGAATCTCAGCCAGAATATAATTGTCCTAGCAGCTCTTATTCCCGGCTTAAAGAAGATGGACAAGGCATCAGTGCTGGGAGATTGTATCAAGTACGTGAAAGAGCTCCAAGAGCGTTTGAGAGTGCTTGAAGAGAACAAGAATAGAGAAGTGGAATCTGTGGCGATGGTGAACAAAGAAGGAGTCAGCTGCGACGATGGTTCAGATTCATGTGATGAAGAAAGGGAAACACTCCCCCGCGTGGAAGCAATAGTGTCAGAGAAGGACGTGCTCCTTCGAATCCACTGCCAAAAACAAAAGGGTCTTTTGCACAAAATACTTGTTGAGATTCAAAGCCTTCATCTCTTTATTGTCAATAGCAGTGTCCTACCTTTCGGGGATTCCATACTAGACATAACCATTGTTGCTCAGATGGCCACGGGCTACAGCTTGGCTATAAATGATCTTGTAAAGAACCTACGCGTGGCTACTTTAAAATGCATGTCATAA 993 0.4481 TNLKDIDGRIIRRQLVIEFGEQINWLYHHYCFSVDDYRFYILFQLLQEEEDINLFSQCHLELLDEDEDLLWPQIPSALHQPFSSQTHTLVDETSLERPTKRPKTSLIFNSSTTTHFSPSSSSSPTSHFHGIVSQTPNGSSETERPKGPASYKSPAQVQDHIIAERKRRENLSQNIIVLAALIPGLKKMDKASVLGDCIKYVKELQERLRVLEENKNREVESVAMVNKEGVSCDDGSDSCDEERETLPRVEAIVSEKDVLLRIHCQKQKGLLHKILVEIQSLHLFIVNSSVLPFGDSILDITIVAQMATGYSLAINDLVKNLRVATLKCMS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01706 330 Gene3D - 150 220 IPR036638 GO:0046983
Pste1g01706 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 223 IPR036638 GO:0046983
Pste1g01706 330 PANTHER BHLH TRANSCRIPTION FACTOR 102 327 - -
Pste1g01706 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Pste1g01706 330 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
Pste1g01706 330 MobiDBLite consensus disorder prediction 88 157 - -
Pste1g01706 330 Coils Coil 201 221 - -
Pste1g01706 330 SMART finulus 161 210 IPR011598 GO:0046983
Pste1g01706 330 MobiDBLite consensus disorder prediction 103 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01706 Pste-Chr1 5238397 5239646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01706 113 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.077 7.22e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste1g01706 HLH 3.7e-07 No_clan