Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01704 ATGGAAGAAGCAATGAGGCGTCTCAACGGGGTGACCCCAATTATCGGACCCGACCCGAAAGGGGATGGAGCAGTAGCCGATAACCCCAAACGCCCCTCTGCCGTGAACAAGAGGGCTTTAAGAGAAGACGGCGGCGGTGCGATGAGGTACCGCGGCGTGAGGCGCAGGCCGTGGGGGCGTTACGCTGCCGAGATTAGGGACCCTCAGTCGAAGGAGCGACGGTGGCTGGGAACCTTCGACACGGCGGAGGAAGCCGCCTGCGCCTACGACTGCGCCGCCAGAGCCATGAGGGGTCTCAAGGCTCGCACCAACTTTGTGTACCCAACTTCGCCGCAACCTTCTTCCGCCACCACCGACCACTTTTTCCCTTTTAATAACTTCCCCAAACACTCTCCACCGCCACTATTCACCAACCATCGCAACCGGCACTTAACCAGTTTTGACTACTCTCACGGCGTTGACTTCTCAGCTCCGCGAAACCCTTCTTCTCTCAACATGCTTCTTTTTCGCGACCTCATACACTCTTCTTCCAATCCTTCTCTGCTTTCTTCTTCCACTCATAACTTCCATGATCAGTTTTACCACAAGGGTACTTCTACCGCTTCTTCTTTTTCATCGTTACCTTGTGTTTCTTCTTCTTCTCTCACTCCTTGTTATTCCATGAATAACTCTTGCGGAGGGTCTTCTTCTGTTACCATGAACAGTCTTTGTGGAACTAATTTCACTGAAAAAGGTGACGATGAAGGTGATGGGTTTTTCTCTCGAGAGTCTTCTGATTCGGGGTTGTTGCAAGAGATAGTTAACAAGTTTTTGCCCAAAACAAAGCCTATTAAATGCGTGAGTCTGCCAAAAATGGAGAATTTTCGCAACCCTCAGGAGGAGGCACTTCTTCCTTCGCTTGTTTCTGAATCAACGCTTGTTTCCACCGCGCAATGCTATGATGAAACCACAAAGGGGTTTCCCAAGAACGAGAGTCTGGGTGTTTTTTCTTCAGATCATCAAGGCTTTTCCATGCAGCAATTCGACATCTATAATAATGGGTTTAATAGCGTGCAATCTATGACTCTGGGGAATGAACCATTCATGATCAATCATGCAGAGAACTGTGTCGCTGAAGATGTTTTTCAGTACCAAGAGCTTCTTAATGCTTTTGCAATCAGGATGCAAAATGCTTAA 1176 0.4881 MEEAMRRLNGVTPIIGPDPKGDGAVADNPKRPSAVNKRALREDGGGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPQPSSATTDHFFPFNNFPKHSPPPLFTNHRNRHLTSFDYSHGVDFSAPRNPSSLNMLLFRDLIHSSSNPSLLSSSTHNFHDQFYHKGTSTASSFSSLPCVSSSSLTPCYSMNNSCGGSSSVTMNSLCGTNFTEKGDDEGDGFFSRESSDSGLLQEIVNKFLPKTKPIKCVSLPKMENFRNPQEEALLPSLVSESTLVSTAQCYDETTKGFPKNESLGVFSSDHQGFSMQQFDIYNNGFNSVQSMTLGNEPFMINHAENCVAEDVFQYQELLNAFAIRMQNA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01704 391 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Pste1g01704 391 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Pste1g01704 391 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Pste1g01704 391 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
Pste1g01704 391 MobiDBLite consensus disorder prediction 1 43 - -
Pste1g01704 391 CDD AP2 49 105 IPR001471 GO:0003700|GO:0006355
Pste1g01704 391 Gene3D AP2/ERF domain 48 107 IPR036955 GO:0003700|GO:0006355
Pste1g01704 391 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Pste1g01704 391 FunFam Ethylene-responsive transcription factor 2 48 107 - -
Pste1g01704 391 Pfam AP2 domain 49 98 IPR001471 GO:0003700|GO:0006355
Pste1g01704 391 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01704 Pste-Chr1 5235748 5236923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01704 1 358 AP2-EREBP Transcription Factor Family AT1G24590 34.115 9.44e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste1g01704 AP2 2.9e-12 CL0081