Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01628 ATGGCTGGTTTGGATTTAGGCACCGCTTCACGCTTCGTCCATAGTCTCCACACACCAGACTTCAACCAAAAGCAACACGAATCCGAGGAAGACGCCAAACAATCAGAAGAGCCGTTTTCAACCGAAGATGGGCCCCACCACGGAGACGTCATCGGCCGGCGGCCCCGTGGGCGTCCACCCGGCTCCAAGAACAAACAGAAGCCGCCGGTCATCATCACTCGGGAGAGCGCCAACACTCTCCGCGCCCACATCCTCGAGGTCGGGACCGGCTGCGACGTCTTCGACAGCGTCGCCACCTACGCTCGCCGCCGCCAGCGTGGGATCTGTATCCTCAGCGGCAGCGGCACTGTCACCAATGTCAGCCTCCGCCAGCCGGCGTCGGCGGGCTCCGTCGTCACGCTTCACGGCAGGTTCGAGATACTGTCCCTGGCGGGATCCTTTCTTCCTCCGCCGGCGCCTCCGGGAGCCACCAGCCTCAGCGTGTACCTGGCCGGCGGGCAGGGGCAGGTGGTGGGCGGCAGTGTGGTCGGAGAGTTGACCGCGGCGGGACCGGTGGTTGTGATCGCGGCTTCTTTCACCAACGTGGCCTACGAGCGATTACCATTAGAAGAAGAAGAACAGGTTCAGATATCTGGTGGTGGTGGTAACAATAACAGTAATAATAATCACAATAGCAATAATCCCTTCCCTGACCCTTCTTCAGGACTTCCTTTCTTCAATTTGCCCATGAATGTTCAGTTGCCTGTGGATGCCTGGGCGGGAAACGCTGCTACACTGCCTTGCGTTTTCGGCCGGCCGGTGGAGAAAGCACTGCCTTTGCTTTGCGCTCACAGATTGAAGCCGTACCACGCTTTGTTCAAACAAGTTGTCACGGCGCTTCGTTGTCCTCCTAAAGTTGCACATCATTCCATCAACCACTGCGCTTCCTCCAAATTATGCTTCTAA 945 0.581 MAGLDLGTASRFVHSLHTPDFNQKQHESEEDAKQSEEPFSTEDGPHHGDVIGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVGTGCDVFDSVATYARRRQRGICILSGSGTVTNVSLRQPASAGSVVTLHGRFEILSLAGSFLPPPAPPGATSLSVYLAGGQGQVVGGSVVGELTAAGPVVVIAASFTNVAYERLPLEEEEQVQISGGGGNNNSNNNHNSNNPFPDPSSGLPFFNLPMNVQLPVDAWAGNAATLPCVFGRPVEKALPLLCAHRLKPYHALFKQVVTALRCPPKVAHHSINHCASSKLCF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01628 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 219 IPR014476 GO:0003680
Pste1g01628 314 FunFam AT-hook motif nuclear-localized protein 80 207 - -
Pste1g01628 314 MobiDBLite consensus disorder prediction 210 231 - -
Pste1g01628 314 CDD DUF296 81 164 IPR005175 -
Pste1g01628 314 MobiDBLite consensus disorder prediction 206 231 - -
Pste1g01628 314 ProSiteProfiles PPC domain profile profile. 77 213 IPR005175 -
Pste1g01628 314 MobiDBLite consensus disorder prediction 20 56 - -
Pste1g01628 314 Gene3D - 80 212 - -
Pste1g01628 314 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 209 - -
Pste1g01628 314 MobiDBLite consensus disorder prediction 1 71 - -
Pste1g01628 314 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 194 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01628 Pste-Chr1 5010248 5013394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01628 1 257 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 58.099 7.65e-91 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01628 1 5010248 5013394 Pste7g00783 7 7124271 7125125 PCT