Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01627 ATGTTGGATGTTGCGGTGTTGATGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTAGGGAGGAGCCAGACCCATGACTACGGAGACGCATTATCAAAGTGCATACTATTCTTGGAGGGGCAGCGATCGGGTTTCCTGCCACAGGATCAGAGAGTGAGTTGGCGAGGGAACTCGGGTTTGAGTGATGGGTGGAACTACAACACGGATCTCACCGGCGGATACTACGACGCCGGCGACAACATCAAATTTGGGTTTCCGATGGCCTTCACAACCACAATGTTGGCGTGGAGCGTGCTGGAATTCGGGGACTTGATGCCTCCCAATGAGTTAAGGAATGCCCTGGTTGCAATTCGTTGGGCCACCGACTATCTGCTCAAGACTGTTTCCCAGCCCAATCGGATTTTCGTTCAGGTGGGTGATCCAAACTCAGATCACGATTGTTGGGAGAGGCCAGAGGACATGGACACGGCGAGGACTACGTATGCTGTTGATGCACCAAATGCTGCTTCTGATGTCGCCGGTGAAACAGCCGCCGCACTAGCAGCATCATCCATGGCGTTCCGGTCATCGGATCCATCTTATGCAGAGACATTGCTTCGAAATGCTATCACCGCCTTTCAATTTGCAGATAACTACAGGGGTGCTTACAGCGACAATGATAATGTCAAGTATAATGCCTGCCCTTATTACTGTGATTTTGATGGCTATCAGGATGAATTGTTATGGGGAGCTGCATGGCTAAGGAGGGCGACGCATGACGGTAATTTCTTGAATTACATTCAAGGGAATGGCAAAACACTTGGTGCCGATGACAACATCAATGAGTTTGGTTGGGATAACAAGCATGCTGGCCTTAACGTACTTGTTTCCAAGGAAGTCATAGAAGGAAACATGTACTCTCTGGAGTCGTACAAGTCCTCAGCTGAGAGCTTCATTTGCACACTTATACCAGAATCACCGAGCTCACACATAGAGTACACTCCTGGTGGACTTGTGTACAGACCCGGTGGTAGCAACTTGCAACATGCAACTTCAATTGCTTTCCTTGAATTGGTCTATGCCAATTACCTAACACATACTTCACAGGCCATCAATTGTGGTAATGTCTATGTCAGTGCACAAACACTTCGCCAACATGCTAAGAGACAAGTTGATTACATTTTGGGTGATAACCCAATGGGATTATCCTACATGGTTGGCTATAGCAACTACTACCCACAACGTATTCATCACCGTGGATCTTCTTTACCCTCCATCAAGGATCATCCCCAGTTCATTGCGTGCAAAGAAGGTTCTATTTATTACAACTCAACAAATCCCAATCCTAATGTACTTGTTGGTGCCATTGTTGGAGGACCCGACGAAAATGATTTTTATGTGGATGATCGAGTTGATTTTAGGAAATCTGAGCCAACCACTTACATTAACGCACCATTTGTTGGAGTTTTAGCATATTTTGCTGCTAATCCCAAATAATTACCATCAGATATAGGTTATTTTGTAAATGAAAAGATATAGGCAGAAGGTATTTCTCATCTTGAGAAAATCAAGTGGCTAGAGGCTTGGATTGGATTTAAGAACACTACTAAATTTGAACTCCCAAAAGCTACTTGGTGACTTATTATCTCATTTGCGGGGAGGGGGGGACTATGTTATGCA 1668 0.4562 MLDVAVLMGLGLGLGLGLGLGLGRSQTHDYGDALSKCILFLEGQRSGFLPQDQRVSWRGNSGLSDGWNYNTDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVLEFGDLMPPNELRNALVAIRWATDYLLKTVSQPNRIFVQVGDPNSDHDCWERPEDMDTARTTYAVDAPNAASDVAGETAAALAASSMAFRSSDPSYAETLLRNAITAFQFADNYRGAYSDNDNVKYNACPYYCDFDGYQDELLWGAAWLRRATHDGNFLNYIQGNGKTLGADDNINEFGWDNKHAGLNVLVSKEVIEGNMYSLESYKSSAESFICTLIPESPSSHIEYTPGGLVYRPGGSNLQHATSIAFLELVYANYLTHTSQAINCGNVYVSAQTLRQHAKRQVDYILGDNPMGLSYMVGYSNYYPQRIHHRGSSLPSIKDHPQFIACKEGSIYYNSTNPNPNVLVGAIVGGPDENDFYVDDRVDFRKSEPTTYINAPFVGVLAYFAANPK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01627 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Pste1g01627 494 Pfam Glycosyl hydrolase family 9 30 486 IPR001701 GO:0004553|GO:0005975
Pste1g01627 494 SUPERFAMILY Six-hairpin glycosidases 23 491 IPR008928 GO:0005975
Pste1g01627 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Pste1g01627 494 Gene3D - 26 492 IPR012341 GO:0005975
Pste1g01627 494 FunFam Endoglucanase 26 494 - -
Pste1g01627 494 PANTHER ENDO-1,4-BETA-GLUCANASE 26 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01627 Pste-Chr1 5005240 5015177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01627 25 492 Glycoside Hydrolase AT1G70710 60.256 0.0 589