Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01608 GTAAAACCCTAAATTAATGAGGCCAAAGCCGGGAGTTCCCTCCCTGCCCTGTGATTCTATTATATATATACTGCTCCTTTCTTTTGTTGTTTCTTGTTCATCGCACTCGCGCTCACCACCTTCTCCAATCTCATATCACTACTTTAAAATTACACATTCTTCTTCTTCCTTCTTCTTCTCCATTTCCATTTCCATTTCTCTCCCCACCCTGCGATCCGCTTTTCCGTTTCGCTTGCGATGGATTCTCGTGAACAGCATCAGCATCAGCATCAGCATCAGCCTCAGCAACAGCAACAGCAATCGCAACCCCAACCGCAACCACAACCGCCAAACATGATGGTGGGACCCGCCTCGTATCCTTCGATGCTGGCCCCCGCCACCGCCCGATTTCCCTTCACCACAACCAACCCTCCTCCTCCACCCCCGGAGCCTCTATCCAACAACGTTAACAACGACATCAACGAGGCTGCCTTGAGGCCCTGCGCCTCGGACTCCACGAAAAAGAAGAGGGGCCGGCCCAGAAAGTACTCCTCCGACGGCAACATTGCCTTGGGCCTGGGCCCAACGAACGCTCCCGCCGAACCTCCCGCCAAGAAGCAACGCGGACGCCCCCCTGGCTCTGGCAAAAAGCAGATGGACGCCCTCGGAATTTCTGGAACCAGTTTCACTCCTCATGTTATCTCGGCCGAAGCTGGCGAGGATATTGCTGCCAAACTTATGGCCTTCTGTGAGCAAGGACCTCGTTCTGTTATCATTCTTTCTGCTAATGGTGCAATCCGCAATGTCACCATTCGACAGGCTGCCTCCCCTGGGGGTGCTGTGTCCTATGAGTTGCTATGCAGTTACACTCTGCCTGCCCCAAAACGACGTGAAATTCTGGGTTCTTTATGTATAACAGGTAATTTGGCTGGTGAACAAAAGCTCTTGCTGAATTTGAGATGGATTATATCTAAGCATGCTATCTGGTTACTGGAACCTGCAGTCATGCAAAACAGCTGGAAATCTTGGAAGTGGTGTTTAGTGCTGGTAATTATGGGTGTTTATGCAGTCTAA 1053 0.51 MDSREQHQHQHQHQPQQQQQQSQPQPQPQPPNMMVGPASYPSMLAPATARFPFTTTNPPPPPPEPLSNNVNNDINEAALRPCASDSTKKKRGRPRKYSSDGNIALGLGPTNAPAEPPAKKQRGRPPGSGKKQMDALGISGTSFTPHVISAEAGEDIAAKLMAFCEQGPRSVIILSANGAIRNVTIRQAASPGGAVSYELLCSYTLPAPKRREILGSLCITGNLAGEQKLLLNLRWIISKHAIWLLEPAVMQNSWKSWKWCLVLVIMGVYAV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01608 271 MobiDBLite consensus disorder prediction 1 133 - -
Pste1g01608 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 195 - -
Pste1g01608 271 CDD DUF296 144 224 IPR005175 -
Pste1g01608 271 MobiDBLite consensus disorder prediction 53 67 - -
Pste1g01608 271 SMART AT_hook_2 119 131 IPR017956 GO:0003677
Pste1g01608 271 SMART AT_hook_2 88 100 IPR017956 GO:0003677
Pste1g01608 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 192 IPR005175 -
Pste1g01608 271 Gene3D - 145 239 - -
Pste1g01608 271 ProSiteProfiles PPC domain profile profile. 140 271 IPR005175 -
Pste1g01608 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 198 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01608 Pste-Chr1 4963488 4965999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01608 87 224 AT-hook Motif Nuclear Localized (AHL) Family AT5G46640 46.707 6.22e-38 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01608 1 4963488 4965999 Pste7g00779 7 7084076 7089657 PCT