Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01606 CAAGGCGTGGACTTTTTTGCCAGTTTTTCTTCAATCAGATCCACCAAACCCATCACACAAAATCACGTAAGATTGTACTCCCAACTCAAAAGCTTCAAACTTTTTTCAGTTTCCAAATTAAGACACAGAGCATAGAGAGAGAAAAAAAGGTAGCTGAATTTTCTTCTTTTGTTACTGTTTTGAGTTTTTCATCAACACAAAGTGAGAGAAGCAAGAAAAAGTTTGAAGCTTTCTTTGTTCCGTTGAATTTGGATGGCCGGCGGCGGAAGTGGGGACCAGCCGCCGTGGAAGGAGGCGGTGCCTCCACGCCCCACCATCTCTCTTCCGCCGCGGTCTGGTTCCATTGAGACCCTTTTCAATGGAGGCTTCAGCCCTGGCCCCATGACTCTTCTCTCTAACTTTCTGGCTGATGGTGATGACTGTAACAAGTCTTTTTCTCAGCTCCTCGCCGGAGCTATGGCTTCTCCGGTCGCCGGCGCCGGCGTGATGAACTCACATGGCCTGTTTTCACCTTCTCAGGTGTCTTTTGGAATGACACACCAACAGGCCCTAGCACAGGTCTCATCACAAGCCAACTCAAATATGCATAACCAGGGTGAACACTACTCATTGTCTGTATCGGTATCATCAGCTACCTCATTGACACAGGTTCCTGCAGCTACTTCCAATACTACACAGCAAATGATGCCACCTTTAACTGCAGATTCTTGGGCTGCAATGACCGATCATTCTCACTCTGAACAAAGATTACAATCTTCGTTGTTGAATGTTGACAAGCCTGCGGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACAGGTGAAGGGTAGTGAGTTTCCTCGAAGTTATTACAAGTGCACACATTCAAACTGTCCTGTTAAGAAAAAGGTTGAGCGCTCACTTGAGGGTCATGTAACTGCCATTATTTATAAAGGAGAACACAACCATCAACGTCCTCATCCTAACAAACGCTCAAAAGACACTGTGACTTCAAATGAAGATTCAAATATGCAATGGAATGTAGATTTAACTTATCGAGGGACCACAACAAATTCGATGGCTAAGATGGATCAAGAGTCTAGTCAGGCAACAGCTGATCGTATATCAGGAACAAGTGACAGCGAGGAAGTAGGTGATCATGAAACTGAAGTGGATGACAAAAATGTTGGGCTTGATCCCAAGAAGAGGACTGTGACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTATTAGATGATGGATATAGATGGCGAAAATATGGGCAGAAAGTTGTGAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACCCCAGGTTGTAATGTCCGAAAGCACGTGGAGAGGGCTTCAACGGATCCTAAAGCTGTCATAACGACATATGAAGGAAAACACAATCATGATGTGCCAGCAGCTAAGATTAACAGCCACACTATGGCCAGCAATACTGCATCACAGTTAAAATCAGAAAATACCAATTTTGGCAGCAGAGGCACCAGTGGCAATGAACAACAGCCGGTCGCACGGCTACGGTTGAAGGAAGAGCAGATCACCTAGTGTGTGCTGGAAGAGCTTACTGCCTTTAAGGAAGAATGAGTCTCATCTCACAACTCATCTTTATTTTCATGTTCCTTGCATTCTTTTTTAGTCTTAGCCTTAAGTTGATCATGGCCTATGAGTGCAATTCCTAAGAAGCAAATAATTCAACACTTTTCTCTTCCACTTCTCTCCACAACCACATCATGATGAAAGAGGTAAAGGCAAAATGGTTTAAACCACAAGTTTGCATGGTGAGCACAGGTTTTGGATGATGCTGTACTATTTGTACCTTTATGTGCATTGAAAATGTAAGTTATGTTGTTTAATATAGTTATTCATCATTTCATCATGTAATTCTTTTCTCTTTTGATATTTTGCTCAAGAATATGACAAAATTTTGGATCATGAAATAAACTCTATCATAAAGATAATATGCTTTAAAAAGTACATTGGCA 2009 0.4241 MAGGGSGDQPPWKEAVPPRPTISLPPRSGSIETLFNGGFSPGPMTLLSNFLADGDDCNKSFSQLLAGAMASPVAGAGVMNSHGLFSPSQVSFGMTHQQALAQVSSQANSNMHNQGEHYSLSVSVSSATSLTQVPAATSNTTQQMMPPLTADSWAAMTDHSHSEQRLQSSLLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHSNCPVKKKVERSLEGHVTAIIYKGEHNHQRPHPNKRSKDTVTSNEDSNMQWNVDLTYRGTTTNSMAKMDQESSQATADRISGTSDSEEVGDHETEVDDKNVGLDPKKRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKINSHTMASNTASQLKSENTNFGSRGTSGNEQQPVARLRLKEEQIT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01606 439 FunFam WRKY transcription factor 163 237 - -
Pste1g01606 439 MobiDBLite consensus disorder prediction 403 439 - -
Pste1g01606 439 Pfam WRKY DNA -binding domain 178 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 Pfam WRKY DNA -binding domain 332 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 SUPERFAMILY WRKY DNA-binding domain 175 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 MobiDBLite consensus disorder prediction 289 310 - -
Pste1g01606 439 SUPERFAMILY WRKY DNA-binding domain 323 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 SMART WRKY_cls 177 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 SMART WRKY_cls 331 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 412 IPR044810 GO:0003700
Pste1g01606 439 Gene3D WRKY domain 316 392 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 Gene3D WRKY domain 164 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 ProSiteProfiles WRKY domain profile. 326 391 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 FunFam WRKY transcription factor 33 318 384 - -
Pste1g01606 439 MobiDBLite consensus disorder prediction 228 247 - -
Pste1g01606 439 ProSiteProfiles WRKY domain profile. 178 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g01606 439 MobiDBLite consensus disorder prediction 270 310 - -
Pste1g01606 439 MobiDBLite consensus disorder prediction 1 28 - -
Pste1g01606 439 MobiDBLite consensus disorder prediction 270 288 - -
Pste1g01606 439 MobiDBLite consensus disorder prediction 403 427 - -
Pste1g01606 439 MobiDBLite consensus disorder prediction 228 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01606 Pste-Chr1 4959006 4963966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01606 19 65 WRKY Transcription Factor Family AT2G03340 65.306 4.84e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste1g01606 WRKY 1e-25 CL0274