Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01604 ATGTCAATTGCGGCAAAAATGGAGGAGATTAAAGTGCCTCTATGTGTAGATTTACAGGTTGGAGAACCAAAGTTTGTTTTTGAAGCTAAGACCATTGAAAAAATGGAGCTACTAGTATTAAGCACATTGGGATGGAATATGCGCGCTTTAACTCCTTGTTCATTCATAGACTACTTCCTTAGCAAGATCACTTGTGAGCAGCGTCTAGCAAAATCTTCCATTTCAATATCAGTGCAGCTCATCCTTAACATAATCAAAGGTATTGACTTCTTGGAATTCCGGCCTTCTGAGATTGCTGCGGCAGTGGCAATTTCTGCTTTAAGGGAATCACAAGCAAAAGAGAATGATAAGGCTGTAGCTAATATCTCTATAGTAGAGAAGGGGAGGGTGATAAAGTGTGTTGAATTGATAAGAGATTTGTCCTTGATCAATGTGGCTGCTACTTTAGGCAGTAAGGTGCCATTTGTGCCCCAAAGTCCTGATGGGGTGCTTGATGCTGGGTGCTTAAGTTATAAGAGTGATGAATTAACAGTTGGGTCATGTCCAAACTCTTCACATAATAGTTCTATTCCAAGCACTACTAAGAGGAGTAAACCAGATGGACCTTCTAATGGAACCTCCTATTCATGAGATGTGAATTTTCTTCCTTCACCAAAGTTCATTTAGTTTGGTTTAAATGGAGTTTGGTGTGATCCTGGAATTCCTTGGAAACATTCTCAATGAGTGTGCTTTGGATGAATAAGATAGGAATTTAAGTGGTTTCGTGCTAGAAGCATGGATTCATCCCAGAGGTGTTGATAGTTTTGGTTTATAGTCAGGCTATAGAAACAGCTACAAATACTTGGGACATTATGTTGTTGGTGGAGAAATTTTTTATGAAACAATGTTGTGGAGGCACGCACAGCATGTCAAAAGTATGAATGTAATATTTGGAGAGGAGAGCTATAATTGTTGTCAATGTGAATGTCCTAAGTTCTCTCATCTTAAAAGAGAATTAATATATAAAAGCAATTCTTTATGGGTTGTTTCTGAATTTTGAAG 1041 0.3823 MSIAAKMEEIKVPLCVDLQVGEPKFVFEAKTIEKMELLVLSTLGWNMRALTPCSFIDYFLSKITCEQRLAKSSISISVQLILNIIKGIDFLEFRPSEIAAAVAISALRESQAKENDKAVANISIVEKGRVIKCVELIRDLSLINVAATLGSKVPFVPQSPDGVLDAGCLSYKSDELTVGSCPNSSHNSSIPSTTKRSKPDGPSNGTSYS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01604 209 SMART Cyclin_C_2 50 184 IPR004367 -
Pste1g01604 209 FunFam D6-type cyclin 44 135 - -
Pste1g01604 209 SUPERFAMILY Cyclin-like 1 47 IPR036915 -
Pste1g01604 209 CDD CYCLIN_AtCycD-like_rpt2 51 137 - -
Pste1g01604 209 Gene3D - 49 136 - -
Pste1g01604 209 MobiDBLite consensus disorder prediction 178 209 - -
Pste1g01604 209 Pfam Cyclin, N-terminal domain 1 48 IPR006671 -
Pste1g01604 209 Gene3D - 1 48 - -
Pste1g01604 209 PANTHER CYCLINS 1 138 IPR039361 -
Pste1g01604 209 SUPERFAMILY Cyclin-like 32 142 IPR036915 -
Pste1g01604 209 Pfam Cyclin, C-terminal domain 51 141 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01604 Pste-Chr1 4950765 4952102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01604 1 181 Core Cell Cycle Gene Families AT2G22490 50.262 2.47e-45 152