Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01603 CCTACAAGCACAACCAGTTTCCTACATAAAGCTCATTCCTTTCCCCACTCTCCCACTCCATTCTCCACACTACACTTCCATGCTCCAACACTGTCACATGGGTTTTCCGCAAAACGCCCCACAGACCTGTTCTGTTCCCTAAGTCCCACCCTTTTGATGACGCTTCTGTTCTTCTAGCACAACCGTTTCTGCATCAATGGTTCACAACTCAGACAGTGCCACCTCCAACCTTCTCTGTTCGGAGAACAGCAGCACCTGCTTCGACGATGATTTGGAATGTGATGGCGCTGATGGGTCTAGAATCTCGCATTTCTGGGACCACGGGAACCTTGGCTATGAACACCAGGGTAGTGGATCGGAGTCCTTGGCGTGTTTTGTGGCGCAGAGTGAGGAAACTGTCAGGGCTATGGTGGAGAGAGAGAGGGAGCATTTGCCCAGGGATGATTACTTGCTCAGGCTGAGGAGTGGAGAGTTGGATTTATGTGTTAGGAAGGAGGCTCTTGATTGGATTTGGAAGGCTCATTCTTATTTTGGCTTTCGACCCTTGAGTTTCTGTTTAGCTGTGAACTACTTGGATCGCTTTCTATCGGTTTTCGAGTTACCGGTGAGATCAAATGTCTAA 622 0.4904 MVHNSDSATSNLLCSENSSTCFDDDLECDGADGSRISHFWDHGNLGYEHQGSGSESLACFVAQSEETVRAMVEREREHLPRDDYLLRLRSGELDLCVRKEALDWIWKAHSYFGFRPLSFCLAVNYLDRFLSVFELPVRSNV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01603 141 Pfam Cyclin, N-terminal domain 68 135 IPR006671 -
Pste1g01603 141 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Pste1g01603 141 Gene3D - 70 80 - -
Pste1g01603 141 SUPERFAMILY Cyclin-like 57 134 IPR036915 -
Pste1g01603 141 Gene3D - 81 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01603 Pste-Chr1 4949506 4950633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01603 60 136 Core Cell Cycle Gene Families AT5G10440 63.636 1.53e-28 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01603 1 4949506 4950633 Pste7g00338 7 3189086 3191725 PCT