Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01578 TACTGTTACAACTTTATTTGCTCTCACCCCTCTGCTTTCACAGGTGTGCAGAGTCAACTTGTCTGTTCTGGGTGTAGAAACCTTCTGCTCTATCCAGTTGGAGCCACCTCTGTGTGCTGTGCTGTTTGCAATGCAGTCACAACAGTGCCACCTCCTGGCACAGAAATGGCCCAGTTAGTTTGTGGAGGCTGTAACACTTTTCTCATGTACATCCGTGGAGCCACAGGTGTGCAATGCTCCTGTTGCCATACGATCAATCTAGCTTTGGAAGCAAATCAGGTGGCACATGTCAACTGTGAAAACTGTAAGATGCTACTCAGGTACCAATATGGAGCAAGATCCGTGAAATGTGCGGTTTGCAGTTTTGTAACATCAGTTGCGGTCAGTACACTCTCTTGTTTATGTCTCAACAAGCACCACCATTGTGCAGAAATTCAGCCCCTAAATCTTTCTGTAAAATTGGTTATAGCAGCACGGCCTTTGTTTAGTCAATATCACGCTGGGGGAATAACGAGTGCGTATGATCTAGCAGAGGAAATTCTCTTTGCATGTATAGAGCTATTTTTCCCTTGAGTGAAAATAAGCAAATAATTGGTATTATTGGCGTACCGTGTAATGTTTTATTTGGAAACAGTGTGAGCCTCTAAAGGAACCAGTCATGCCCCTTTAGTGTAGTGGCTGTTTATATTTCTCCAATTTCAATGGCAGTGTCTGCCAAAAAGCTATGTATTTGGAATAACTATTTATGATAAGATTATTGATTCTGAG 768 0.4258 YCYNFICSHPSAFTGVQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTTVPPPGTEMAQLVCGGCNTFLMYIRGATGVQCSCCHTINLALEANQVAHVNCENCKMLLRYQYGARSVKCAVCSFVTSVAVSTLSCLCLNKHHHCAEIQPLNLSVKLVIAARPLFSQYHAGGITSAYDLAEEILFACIELFFP 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01578 190 NCBIfam zinc finger domain, LSD1 subclass 19 49 IPR005735 -
Pste1g01578 190 NCBIfam zinc finger domain, LSD1 subclass 96 125 IPR005735 -
Pste1g01578 190 NCBIfam zinc finger domain, LSD1 subclass 58 87 IPR005735 -
Pste1g01578 190 PANTHER PROTEIN LSD1 17 139 IPR040319 -
Pste1g01578 190 Pfam LSD1 zinc finger 61 85 IPR005735 -
Pste1g01578 190 Pfam LSD1 zinc finger 99 123 IPR005735 -
Pste1g01578 190 Pfam LSD1 zinc finger 22 46 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01578 Pste-Chr1 4901840 4904026 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Pste1g01578 zf-LSD1 1.3e-10 No_clan