Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01576 AATTCGAGTCTACCATTCCTACTCTCAATCATGATCCAAATTGAAACCTTCCTAAACTCAATATCCAAACACCTAATGCATCCTTTTCTATGGAGAATCACGGGATTTGTGTCAAGCATTGTTGGGTTCAGCTGTTATGCCCTCAGCCCCTCATTCCACTACTTGTTCGGACAATGGACCCCACTGAAGGTTGTCGTGTACAGCATTGCTAGCTCACTGTTTGGTTTCTCTATGCTCTTTGTTAAAAGATGCAGTAGGGGATGTTGGAGGAGTTTGTTCTTGAAATCACAGATAGGTTTTGTTGTATTAACGCTTACATCTATGTGGTCATATCTGGAAGAGCGTAGTGAAGAAGGGAAAGCAGAAAACAGGTATGGCAAAATAATGAATGCCACTTCAAGTGGGGCGTTTGCTATGACAGCAATGAGCTTGTCAAGACAACTTCAGCTTGGATTCGAAGTTGGTCTCTCTAACTTCCTCATTGGATGCTTCATGGTGACATTGATGAAGATGAGCTTTAAGTTAGCTCCACTTGCTGCATTCTTCTGCTATTTTTTCATCAACATCCGTTCCATTTCTGATTTCTTACTTAAAATGCAACCAAACGGTCCGGCACAACAGGCTTGGGGGCCTCTCTTTCACCAAGATACAGTAGAATTGCAATCAATTTCTGATGGCTTAGCAAACTATATAAATGAGGAGAATTTTGTAGATTTAGAAGCAAATTCTGATGTCATAGAAGCAAATTCTGATGTCATTCCACCTGATACGGTTGGTGAAAGAGAAAACGTAGATTTGGAATCCAATTCTAATGTCGTTGCACGTGATACCGTTGGAGAAAGAGAAAATGTAGGTTTAGAAGCAAATTCTGATGTCTCTAATAGTGATACTGAAAGTTTAATCAAGAAGGAATCATTGGAATCCGAAGGTGTAGGAGATGATATCAGAACACTCCGTAATCAGAAAGGAGATAGACCATATCCTGACAGTGATAATAGGACTCCTAGAAGGCCTGAACCAGCATTAGCTAGTGAATTAGTTGATGAGGATGAAACACAGGAATGGCAGGCACAAGTGGAACCAGGGGTTAGTATTAGCTTTGTGCGTCTTCCTAACGGGATGAATGCTTTAAAAAGAATTCTCTTCAGCAAAGAGATGTTCAACAAGTGGCAAGCTGAAAGATGGTGGGGTGAGAATTGCGATAGAATCGTGGAGCTTTTCAACGTTAAGAGATTTTAACATCGTTCGAAATCATAGGATGAGGTAGAGTACAACTTTTACGCTCATATGATGATGTTAAAACTTTATTTTATCGATCTTGTTATTTTGTATTAAAAAGGGGTAAAATACTTATCTCCAAGTTCGTCACTATTTTGAGAGGACTTGAAAATATTTTCATGTACATTATTATTATTGCCTTTGAATTACGTAGAGATTCTTCTTACTCATATGATGACATGTACACAAGA 1469 0.3901 NSSLPFLLSIMIQIETFLNSISKHLMHPFLWRITGFVSSIVGFSCYALSPSFHYLFGQWTPLKVVVYSIASSLFGFSMLFVKRCSRGCWRSLFLKSQIGFVVLTLTSMWSYLEERSEEGKAENRYGKIMNATSSGAFAMTAMSLSRQLQLGFEVGLSNFLIGCFMVTLMKMSFKLAPLAAFFCYFFINIRSISDFLLKMQPNGPAQQAWGPLFHQDTVELQSISDGLANYINEENFVDLEANSDVIEANSDVIPPDTVGERENVDLESNSNVVARDTVGERENVGLEANSDVSNSDTESLIKKESLESEGVGDDIRTLRNQKGDRPYPDSDNRTPRRPEPALASELVDEDETQEWQAQVEPGVSISFVRLPNGMNALKRILFSKEMFNKWQAERWWGENCDRIVELFNVKRF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01576 412 MobiDBLite consensus disorder prediction 297 338 - -
Pste1g01576 412 MobiDBLite consensus disorder prediction 288 338 - -
Pste1g01576 412 ProSiteProfiles BRX domain profile. 353 408 IPR013591 -
Pste1g01576 412 PANTHER PROTEIN BREVIS RADIX-LIKE 1 326 412 IPR044532 -
Pste1g01576 412 Pfam Transcription factor regulating root and shoot growth via Pin3 353 406 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01576 Pste-Chr1 4891113 4893369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01576 346 412 Major Intrinsic Protein MIP AT1G31880 67.164 2.47e-26 107