Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01573 ATGGGCTGCACTGTGAAGAATAAGAACAGTCGGGTTAATCGGAAATCCCGTTCGGTGAAAGTCGATTCTGATTCGTGTTGTCATTCTAACAAGAAATGGATGGTTCCTTATAAATACTATGCTGGCATGTGTCCCAATATCGATTCAAACCCTAATGTTAACTCATCTAGTTGGGTTTTATGCACTGAATCTCATTTGAATAACATTTTGTTGAGAAACATTGATATTATATACAATGATACCGTGTCAAAGCTTGTTGCTTTGGGGCACAGTGAGGATGATGCCTTGAAAGCGGTTCTTCATAATGGACATTGTTATGGTGCCAATGATTTGGCAACTAATGTACTGCACAACTCCCTGTCTTATTTGTACAGGGGGAACTCTGATAAGCATGAGTTCTCTGATTTGAAGAAACTGGAGGAGTACTCTCTGGATAACCTTGTGACTTTGTTGCAAGAAATGAGGCCCGATGTAAATAGTAGGGCTGATGCTATGTGGTGTCTACTCATGAGCAATTTTCATGTGCTAAAGGCTAGCCGCATCCAACTTCCTGATGGAAACATGTGCCCTCCTCATTTACCTGACTTTGAGAGTGAGGAATGGAAATCAGGGAACAAGAGAAGCTCAGTTTTCCCTTTGAATGGGTTCTTTTGTGGTACTGAGATGACCCTACGGTTACAAAGAGATATTGAATTCCCCAAACGACTTGATCTTACTCCTGCCATGAAGTGTTTGTTGAAAAGAAATGTTGCAATGTTTGCTGATGGTTATAGGGCTAACTCAAAGGAGGTACAGTCACAAGTCGGTGAATTTACTGGGATTAGCACTGTTTCGAAATTGGATTCTTCACCTGTTTCTGAGACTGCAATCCTTGGTGAGAAGCCTGGTCACCCTCCCAATCCGATTGACCACAATGACTTGAACTCTGTGCTTAGTAAATTTCTCAATCTAAATATTGATGACAGCGTGGAGTTTGTTGCAGAAGATGAGAAGGATGAGGTGATAGTCACTCTAGTGAATCAGATAAGGGATCTTGAGAAACAGGTCAAGGAGAGGAAAGATTGGGCTCATGAGAAGGCAATCCAAGCAGCAAGAAAGCTAAGTAGTGAACTGATTGAGCTGAAAATGTTCAAGATGGAAAGAGAAGAAAATCAAAAAATGAAGAAGGGGAAAGAGGTGGCTGAGGAGCTTGAGGACCCAACCATGATGAGACTTGCAGAAATGGAGAATTCCTTGAGAAAAGCTAGTGGTCAAATGGACCAAGCAACTGCAGCTGTCAGAAAACTTGAGGCAGAGAAAGCTGAAATCAAAGCTGAGTTAGAGGCTTCTAAATTGAATGCATCAGAGTCAGTTGCAAACTGCTTGCAAGTTGCAAAAAGGGAGAAAAAGTGCTTAAGGAAGCTTCTGACTTGGGAAAAACAGAGAGCTAAGATACAACAGGATATTTCAGATGAAAAACAGAAGATATTGGAGATACAACAAGAATTGGCTCAGACTAAACAGGCTTGGGTCATGAGGAATGAAGAGTTGAAGGCTAAGGAGGAAGCCTTAGCACTAATTGAAGAGGAACGCCGTTCTAAGGAAGCAGCTGAGGCTAGTAAGAAAAGAAATCTTAAAGCTTTAAGCCTGAAGATAGAGATAGATTTCCAACGTCGTAAAGATGACCTCCTAAGGCTTGAGCAGGAGATTTCGCATCTTAAAGCATCTACGAGGCCTGCTACTTTGCCTACAAGTGAGTGTGAGTCTGAGGAAACAGAGCCCCAGGGAGAGACAATTGCTAAGCTTCTGCAAGAATTAGATAACGTGCATGATTTTTCAGGAAAAGAAGCCGACGGTAGTACTGATAGAGAATGCTTTATCTGTGGAAAAGATGAGGTTTCCGTAATTTTCTTGCCATGTGCACATCAAGTTATGTGTGCTAGTTGCGGTATAGAGTATGGGAGAAATGGCAAAGCTGTTTGTCCATGCTGCCGGGTTCCAATCGAACAGAGAATTCATATATTTGGAGCAGGTTCTTAGTCTCGCATTGGAGTTACTGTTGTTACACATTTCTTTGCACTCAGTGGAGTTTCCGTCCTTGATCTCACTCTACCGTGGAGTGTGAGCATAATGAGGAATCTTTTATGTAAAAACTTTTTGTTCTGTTTTTAGTTTATGTTTCGAATGTCTGAAAACTTGTTAGCTGCAAAATAAGAAATAGGCAAATATTAACATAGTGTTTTGAAGACACTAGTCAAAGATTAAAAATT 2249 0.4104 MGCTVKNKNSRVNRKSRSVKVDSDSCCHSNKKWMVPYKYYAGMCPNIDSNPNVNSSSWVLCTESHLNNILLRNIDIIYNDTVSKLVALGHSEDDALKAVLHNGHCYGANDLATNVLHNSLSYLYRGNSDKHEFSDLKKLEEYSLDNLVTLLQEMRPDVNSRADAMWCLLMSNFHVLKASRIQLPDGNMCPPHLPDFESEEWKSGNKRSSVFPLNGFFCGTEMTLRLQRDIEFPKRLDLTPAMKCLLKRNVAMFADGYRANSKEVQSQVGEFTGISTVSKLDSSPVSETAILGEKPGHPPNPIDHNDLNSVLSKFLNLNIDDSVEFVAEDEKDEVIVTLVNQIRDLEKQVKERKDWAHEKAIQAARKLSSELIELKMFKMEREENQKMKKGKEVAEELEDPTMMRLAEMENSLRKASGQMDQATAAVRKLEAEKAEIKAELEASKLNASESVANCLQVAKREKKCLRKLLTWEKQRAKIQQDISDEKQKILEIQQELAQTKQAWVMRNEELKAKEEALALIEEERRSKEAAEASKKRNLKALSLKIEIDFQRRKDDLLRLEQEISHLKASTRPATLPTSECESEETEPQGETIAKLLQELDNVHDFSGKEADGSTDRECFICGKDEVSVIFLPCAHQVMCASCGIEYGRNGKAVCPCCRVPIEQRIHIFGAGS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01573 672 ProSiteProfiles Zinc finger RING-type profile. 618 658 IPR001841 -
Pste1g01573 672 Coils Coil 405 446 - -
Pste1g01573 672 Pfam Zinc finger, C3HC4 type (RING finger) 615 663 - -
Pste1g01573 672 Coils Coil 510 533 - -
Pste1g01573 672 Coils Coil 468 502 - -
Pste1g01573 672 Pfam Family of unknown function (DUF6592) 73 180 IPR046527 -
Pste1g01573 672 PANTHER OS05G0141500 PROTEIN 1 666 IPR046934 -
Pste1g01573 672 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 606 669 IPR013083 -
Pste1g01573 672 SUPERFAMILY RING/U-box 598 665 - -
Pste1g01573 672 CDD RING-HC_MIP1-like 613 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01573 Pste-Chr1 4883056 4886401 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01573 1 4883056 4886401 Pste7g00761 7 6936340 6942405 PCT