Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01548 GATGACTGCCATTTTACCCTCTCATTTAATGCAACTCAAGGGTGCCTGCCAGTTTTCCCTTTTTTTTCTTCATTATTTTTCCCATTAAAACATATTGCCACCACCCCAATCTCAAAGACCAGTGCATAAAAAACCCTCCAGAAGCTAAAACCCAAAGTTCTCCTGTGTCTTCTTCTTCTTCTTCTCTCTCAACAACTTATGTTGTTTCTGTTGTCACATCTTCAAACTTGTAGTGAAAGCACAAAAACCAAATCATCCCATCTTCTTATATTCTCTTAAGTCTTAACCACCCTCTCTCTCCTTATATCTAACCTCCACTTTTTTTCTCTTAAAACAAAGCATGGAAGAGGCAGAGGAGTCCACCAATGCTAACCAGAAGTTCACCACCAAAAGAAGTTTCAGAAATGGAGGCAACTCTCATGAGCATCATCATTATCACCATCACCACCACCACCACCACCATCATCATCACCACTATCAGCACCATCATCAGCTGCTACAATACTCAACTCAGCTTGGTTTCTGTAACAACCAGAACAAGTATCAGAGATACTACCCAGCTCTTCTTCCTCTACCTTCTCTTATTCCTCTACCCCTACAACAGCTTCCTTTGACTCCACCCTTCCCTCAAAACCACACCATCAAGTCAAAAACCCATTTGCACAAACCTCCATGCAAACTTAATAGCTCACCCTCCTCAGATTACAAACTCTCTCAACCATCACTTGATCCTGGTCCAAAGGAACTTGAGCAGCAAACTAAGGCTTCCTTTAAAGGAGATGATGGGAAGAAACTCATTCCAGCTAGGAAGCCACAGGCAGTAATTGTTGCAAGGAGGCCAGACTCTGGTGGCAAAGAAGGCTCCGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAGTTTGATCCATCACAAAAGATTTATCATTACAATGTTGAAATCACGCCTCATCCCTCCAAGGATGTTGCTAGAGCAATCAAGCACAAGTTGGTAAATAACAATTCTGCAGTCCTATCAGGTGCTACTCCGGCATATGATGGGAGAAAGAATCTTTATAGTCCAGTTGAATTCCAAAATGACAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAGCAAGTTGACTTCACCTTATGGAGAAATGTCTGACTTGAAAGAGAAGCATGAACAGCTTAAACTGTTCAGGATAAATATCAAACTGGTCTCAAAGATCAATGGGAAGGAGTTGAGTAACTACTTGAGTAAAGAGGGTGATGACTGGATGCCACTTCCACAAGATTATCTACATGCTTTGGACGTAGTTCTTAGGGAGAGCCCTACTGAGAACTGCATCCCTGTAGGGAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAAGATATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCCACACAACAAGGACTTGCTCTCAATGTGGATTTCTCAGTAACTGCCTTTCATGAGAGCATAGGAGTGATTCCATACTTGCAAAAACGCCTCGAGTTTCTTCGCGACCTTTCTCAAAGGAAGACAACTCAATTAGCTGGTGAAGAGAGGAAGGAAGTGGAAAAGGCATTGAAGAACATCAGGGTCTTTGTTTGCCATAGAGAAACTGTTCAGCGATACCGTGTCTATGGCTTAACCGAGGAAGCCACTGAAAACCTTTGGTTTGCTGACAGAGATGGTAAGAACCTGAGGCTGGTGAATTACTTTAAAGACCATTATAACTATGACATACAATACAGAAAATTGCCATGCTTGCAAATAAGTAGGAGTAAGCCTTGTTATCTCCCTATGGAGCTTTGTGTAATCTGTGAAGGACAGAAGTTCCTTGGGAAACTGTCTGATGATCAAACAGCAAGAATACTTAAAATGGGCTGCCAAAGACCAGGAGAACGAAAAGCCATTGTTGAAGGAGTCATGAGAGGAACTGTTGGGCCTACCAGTGGTGACCAGGAAAAAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGTAGAATTCTTCACCCTCCCAAACTGAAGCTTGGAGATGGAGGTCATGTGAGAAACCTGACTCCTTCACGTCATGACCGCCAATGGAACCTTCTTGATGGCCATGTCTTTGAAGGAACTACAATTGAAAGGTGGGCACTAATTAGTTTTGGGGGCACATCTGAGCAGAAATCAAATGTCCCTAGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGCATTTTTCTCAACAAGAACACAGTTACTAGTCCTCAATTTGAATCAAGCCAGATTCTGAACAATGTCACCCTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAGCGAATTGCTGAGACAAGTGTTGGTGTTGTTAGCCAATGCTGCCTGTACCCGAATCTCAACAAGTTAAGTTCACAGTTTTTGGCTAATTTGGCCCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCCTTGTACAGCTCACTACCTTCTCAAATACCGCGCCTCTTTCATATCGATGAGCCGGTGATGTTCATGGGTGCAGATGTGACACATCCTCACCCTCTTGATGATTTCAGTCCATCTGTTGCTGCCGTTGTTGGTAGCATGAATTGGCCAACAGCTAACAAATACATTTCAAGAATAAGGTCTCAAACACACAGACAAGAAATCATCCAGGATCTTGGTGCCATGGTGGGGGAATTGCTTGATGATTTTTACCAAGAGGTAGAGAAACTCCCCAATAGAATCATCTTCTTCAGAGATGGTGTTAGTGAAACTCAGTTTTACAAAGTTCTGGAAGAGGAACTGCAATCCATAAAGAGTGCATGCTCAAGGTTTCCTGGTTACAAACCTTCCATTACTTTTGCAGTTGTGCAAAAGAGGCATCACACTAGGTTGTTTCCCTTTGAAACTGACCAGTCTTTATCTCAAAACCATTTTCAATATGAAAACATTCCTCCTGGGACTGTGGTTGATTCTGTGATCACTCATCCAAAGGAATTTGACTTCTATCTTTGTAGCCATTGGGGTGTGAAGGGAACAAGTAGGCCAGCTCACTACCATGTCTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTACAGAAACTGGTTTACAACTTATGCTACACTTTTGTTAGGTGTACTAAGCCAATTTCTTTGGTGCCTCCTGCATATTATGCCCATTTAGCTGCATATAGAGGCAGACTCTACCTTGAGAGATCAGAATCCTTAGGTTTGTTCAGAAGTACATCTACACTATCCAGAGCTGCTCCTCCAAAGACAACACCTCTACCTAAACTTAGTGAAAACATCAAGAAACTCATGTTCTACTGCTAGTGAGAACTCTTCTTCAGCCAATGCCATTTGATTTCTAGATAGTTTATTTAAAAGACGTGCAGGATAAATATCAGTGGTGCAAAAAATTTAAAGACATGTAATCTTTGCGTTTTATCTAACCAAAAAGTTTTCCAAAGATGCAGGTTAATCATAATGCATTTCTAACTGTATATTTTTTTTTTCTAGTTTAATTGTGAC 3628 0.4173 MEEAEESTNANQKFTTKRSFRNGGNSHEHHHYHHHHHHHHHHHHHYQHHHQLLQYSTQLGFCNNQNKYQRYYPALLPLPSLIPLPLQQLPLTPPFPQNHTIKSKTHLHKPPCKLNSSPSSDYKLSQPSLDPGPKELEQQTKASFKGDDGKKLIPARKPQAVIVARRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDVARAIKHKLVNNNSAVLSGATPAYDGRKNLYSPVEFQNDKLEFYISLPIPTSKLTSPYGEMSDLKEKHEQLKLFRINIKLVSKINGKELSNYLSKEGDDWMPLPQDYLHALDVVLRESPTENCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTQLAGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFADRDGKNLRLVNYFKDHYNYDIQYRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKAIVEGVMRGTVGPTSGDQEKEFKLQVSREMTKLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTTIERWALISFGGTSEQKSNVPRFINQLSQRCEQLGIFLNKNTVTSPQFESSQILNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYPNLNKLSSQFLANLALKINAKVGGCTVALYSSLPSQIPRLFHIDEPVMFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLEEELQSIKSACSRFPGYKPSITFAVVQKRHHTRLFPFETDQSLSQNHFQYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPAHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTTPLPKLSENIKKLMFYC 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01548 1029 FunFam Argonaute 10 566 742 - -
Pste1g01548 1029 Gene3D - 751 1029 IPR036397 GO:0003676
Pste1g01548 1029 Pfam N-terminal domain of argonaute 177 323 IPR032474 -
Pste1g01548 1029 FunFam Protein argonaute 7 379 505 - -
Pste1g01548 1029 SMART PAZ_2_a_3 392 523 IPR003100 GO:0005515
Pste1g01548 1029 SUPERFAMILY PAZ domain 379 537 IPR036085 GO:0005515
Pste1g01548 1029 Gene3D - 566 742 - -
Pste1g01548 1029 MobiDBLite consensus disorder prediction 110 126 - -
Pste1g01548 1029 ProSiteProfiles Piwi domain profile. 680 990 IPR003165 GO:0003676
Pste1g01548 1029 SMART Piwi_a_2 680 990 IPR003165 GO:0003676
Pste1g01548 1029 Pfam Argonaute linker 1 domain 333 382 IPR014811 -
Pste1g01548 1029 CDD Piwi_ago-like 549 989 IPR045246 -
Pste1g01548 1029 ProSiteProfiles PAZ domain profile. 392 501 IPR003100 GO:0005515
Pste1g01548 1029 SMART DUF1785_2 332 384 IPR014811 -
Pste1g01548 1029 MobiDBLite consensus disorder prediction 1 51 - -
Pste1g01548 1029 Pfam Piwi domain 681 987 IPR003165 GO:0003676
Pste1g01548 1029 Gene3D paz domain 378 505 - -
Pste1g01548 1029 CDD PAZ_argonaute_like 388 500 - -
Pste1g01548 1029 MobiDBLite consensus disorder prediction 95 136 - -
Pste1g01548 1029 Pfam PAZ domain 395 517 IPR003100 GO:0005515
Pste1g01548 1029 MobiDBLite consensus disorder prediction 27 50 - -
Pste1g01548 1029 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 157 992 - -
Pste1g01548 1029 SUPERFAMILY Ribonuclease H-like 665 990 IPR012337 -
Pste1g01548 1029 FunFam protein argonaute 10-like 749 1029 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01548 Pste-Chr1 4821061 4826557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01548 116 1029 Eukaryotic Initiation Factors Gene Family AT1G48410 40.580 0.0 644