Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01544 ATGGCCATTAGAAAATCAAACAAGCTTCCCCAACATGCAGTTTTGAAGCAAATCCTAAAGAGGTGTTCAAGCCTAGGAAAGAAAAATGGGTACGATGATGAGGGGCAACCTGTTGATGTCCCAAAAGGACACTTCGCCGTTTATGTAGGTGAAAACCGAAGTAGGTACATTGTGCCAATCTCATTCTTGGCTCACCCTGAGTTCCAATCCCTCCTTCGACAAGCCGAAGAAGAATTTGGTTTTGATCACGAGATGGGCCTCACTATTCCTTGTGAAGAAGTTGTCTTCAGAAAGAGTGGAGGTCCGGCTGATGATGTATTTGCAGTTTCCCCCGCCCCTTCACTGCTAACTTGCTTATGA 360 0.4556 MAIRKSNKLPQHAVLKQILKRCSSLGKKNGYDDEGQPVDVPKGHFAVYVGENRSRYIVPISFLAHPEFQSLLRQAEEEFGFDHEMGLTIPCEEVVFRKSGGPADDVFAVSPAPSLLTCL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01544 119 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 97 IPR003676 GO:0009733
Pste1g01544 119 Pfam Auxin responsive protein 27 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01544 Pste-Chr1 4813380 4816960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01544 19 114 Calmodulin-binding Proteins AT3G43120 44.554 3.75e-21 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01544 1 4813380 4816960 Pste1g01544 1 4813380 4816960 ECH