Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01534 GGAATTTTAAAAGCTATATATATAAATACCTTCACAAACAACACAATCCATTACCATCCTCAAGCATCAATACTTAGGTTCTTTCTCTCTAAATTTTTTGTAGTTCTTCTTCCTTCAAACAATCAAAAGATGGGTTTCCGTTTACTTGCTATTCGCCGGGCATCATTCACAGCTAACCAAGCAACTTCAAAGTTTGTTGGAGTACCAAAGGGATATCTTGCAGTTTATGTTGGAGCAAAACAAAAGCGGTTTGTCATTCCCATATCATACTTGAACCAACCTTCATTCCAAGACTTGCTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAACGAAGATGTCTTCCAAAAACAAACAATGGGCTTCCGTATACCTGCTATTCGACGGACATCATTCACAACTCGCAAAGCAGCTTCAAATTCTGTTGAAATCCAAAAAGGCTATCTTCCAGTGTACGTTGGCGAGAAAAAGAAGCGATTTTTGATTCCCATATCATATTTAAACCAACCTTCATTCCAAGACTCACTGAGTCAAGCTGAGAAAGAGTTTGGATATGATCATCCCACCGGAGGCTTCACAATTCCATGCAGCGAAGATAGATCATTTACAAGACAAGCAGCTAGCAAGTTTGTGGAAGTCCCAAACGGCTATATTGCAGTTTATGTTGGAGAGAAAATGAAGAGACTCATGATTTCCATATCATTCCTGAACCAACCTTTATTTCAAGAATGGCTAAGACAAGATGAAGACGAGTTCGGTTATTATTATCTTATGGGAGGTCTAACAATTACTTGCAATGAAGAGCATCAGACTAGAAACGCTTGTGTTACAAGCTGTTGGATATCATTGTGTGTGTGGAGTAACAAACAAGAAATAGAAACCATGGGTTTTGGTATGCTTGGTGTTAGAAGAGCTAGACAAACAATGTATAAGGGAGCAGAAGTCCCAAAAGGATATCTTGCCGTGTATGTTGGAGAAAAAAAGAAGCGGTTCGTAATTCCGATTGGATGCTTGAACCAACCTTCGTTTCAAGACTTGCTAAGCAAAGCAGAAGAAGAATATGTGTACCATCATCCAATGGGTGGCCTTACAATTCCTTGCAAAGAAGATGTCTTCTTAAATATCATGTCGCTTCTCACTTGCATACTTCTCAACCATACACATTAA 1197 0.3935 GILKAIYINTFTNNTIHYHPQASILRFFLSKFFVVLLPSNNQKMGFRLLAIRRASFTANQATSKFVGVPKGYLAVYVGAKQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCNEDVFQKQTMGFRIPAIRRTSFTTRKAASNSVEIQKGYLPVYVGEKKKRFLIPISYLNQPSFQDSLSQAEKEFGYDHPTGGFTIPCSEDRSFTRQAASKFVEVPNGYIAVYVGEKMKRLMISISFLNQPLFQEWLRQDEDEFGYYYLMGGLTITCNEEHQTRNACVTSCWISLCVWSNKQEIETMGFGMLGVRRARQTMYKGAEVPKGYLAVYVGEKKKRFVIPIGCLNQPSFQDLLSKAEEEYVYHHPMGGLTIPCKEDVFLNIMSLLTCILLNHTH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01534 398 Pfam Auxin responsive protein 139 209 IPR003676 GO:0009733
Pste1g01534 398 Pfam Auxin responsive protein 219 277 IPR003676 GO:0009733
Pste1g01534 398 Pfam Auxin responsive protein 53 127 IPR003676 GO:0009733
Pste1g01534 398 Pfam Auxin responsive protein 319 389 IPR003676 GO:0009733
Pste1g01534 398 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 220 279 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01534 Pste-Chr1 4789736 4797573 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01534 324 392 Calmodulin-binding Proteins AT3G43120 53.623 6.31e-14 67.4