Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01526 ATGGGTTTTCGCATGCCAGGTATTATTAGACATGCATCATTTTCTGCAGCTAGAGGAACTCGCAAGGGACTTGAAGTCCCAAAAGACTATCTTGTCTATGATGGAGATAAAGTAATGCGGTATGTGATTTCAGTGTCATACTTGAACCATCTTTCATTTCAACAATCGCTAAGTCAAGCAGAAGAAGAGTTTGGATTTTATCATCCAACTGGTGGTCTTACAATTACATGCAGGGAGGATGAGTTTCTAAACCTCACTTCTTGCTTGAATTCTTATCTAGCTCTACCACTAAAATTTCTATCACTTGATAATATCTTTAGACTTCTCTCCATCATGAAGACTGGCAACAGATTTGTGGGAATAGCTCATGCCAAGCAGAAACTTCAGAGAACTCTTTCACAAAGAATCAAAATGGCTGCAGCTGTTGCTGATGTTCCGAAAGGCCACTTGGCAGTGTACGTTGGAGAGAACCATAAGAGGTTTGTAATTCCAATATCATACCTAAGCCACCCTTTATTCAGAGACTTGTTGGACTGGGCTGAAGAAGAATTCGGATTCAATCACCCAATGGGTGGTCTCACTATTCCATGTACTGAAGATTACTTCATTACTCTAACTTCTTCTCTTAATTAA 633 0.3965 MGFRMPGIIRHASFSAARGTRKGLEVPKDYLVYDGDKVMRYVISVSYLNHLSFQQSLSQAEEEFGFYHPTGGLTITCREDEFLNLTSCLNSYLALPLKFLSLDNIFRLLSIMKTGNRFVGIAHAKQKLQRTLSQRIKMAAAVADVPKGHLAVYVGENHKRFVIPISYLSHPLFRDLLDWAEEEFGFNHPMGGLTIPCTEDYFITLTSSLN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01526 210 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 22 89 IPR003676 GO:0009733
Pste1g01526 210 Pfam Auxin responsive protein 133 208 IPR003676 GO:0009733
Pste1g01526 210 Pfam Auxin responsive protein 20 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01526 Pste-Chr1 4769765 4778191 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01526 25 93 Calmodulin-binding Proteins AT5G20810 44.286 3.52e-10 55.5