Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01515 TCTGGGGGACTGCGAGAGCGAAGGAAAATAGAGAAAGGTCACCGCTCACCACCGACGATTGTTTTTCCGTTCCCTAGTCTGACCCTTTAATCCCAATTGAGAAAGAATCATGAAGCTGAAGACATATGCAGGTCTTAGTTTCATTGCAACTCTGGCTATTATATATCATGCGTTTAACAGTAGGGGCCAGTTTTATCCCGCAATGGTGTATCTATCAACTTCAAAGATCAGTTTGGTGCTTCTTCTCAACATGGGTTTGGTCTTTATGTGTATTCTATGGCAATTAACCAAGAGGGTGTTCTTGGGTTCCCTACGAGAGGCTGAGGTTGAGAGGCTTAACGAACAATCGTGGAGGGAGGTTATGGAAATCCTCTTTGCAATCACCATTTTTAGGCAGGATTTTTCTGTCACATTCCTTGCAATGGTCACAGCATTGTTGTTGATCAAGGCTCTGCATTGGTTGGCTCAAAAGAGAGTTGAGTACATCGAGACCACTCCTTCCGTGCCAATGCTGTCCCATGTTCGAATTGTATCTTTTATGGGCTTCCTTCTTCTTCTAGATAGCCTTTTCTTATACAGTTCTATGAAGCATCTGATAGAAACGTGGCAGGCTTCGGTTTCACTGTTCTTTTGTTTCGAGTACATGATATTGGCAACCACAACGGTGTCAATTTTTGTAAAATATCTTTTCTATGTTAGTGACATGCTTATGGAGGGACAATGGGAAAAGAAACCGGTCTTCACATTTTACCTGGAACTCATTAGGGACTTGCTTCACTTGTCTATAAACTATGGTATTCCCTTGCACCTTATACGGGAGTTGTACGAGACATTTAGGAACTTCAAAGTCCGTGTTGCAGATTACATACGATATCGTAAAATCACTTCAAATATGAATGATCGTTTTCCAGATGCAACCCCTGAAGAGCTTAATGCAAGTGACGCAACCTGCATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTTATATGTGGACATCTTTTTCATGTTCATTGTCTCCGATCATGGCTGGAGCGGCAGCACACTTGCCCCACCTGCAGAGCCTTAGTTGTACCACCCGAAACTGGGACAACTGCAGCTGCAGGGCAGCAAGGATCACAGTCAGATGATCATCAACAGGGAACAACTGGGACAGGCAGTGGAAGCACAGCTCAGACTTCAGCTACTGATAGCTTGAGTCGACATCAAGCTAGACTCCAAGCTGCTGCTGCTGCTGCTTCAATATATGAGAAGTCTTATGTGTACCCATCTGCAAATTCTTTTCAAACTTCCAGTGAACAAGCACAACAGCAGTTTCTTACCTCTGGTGGACCAACTAATATATCCTTTTCTCCCATGCAACACTTCCATTTTCTACCTTCACAAGCACGTGCAGTTCCTGTGACTTGTGGAGAGGGGTTTGAAAATGATCCAAATATCCCAAACTCGCAGCTGGAAGCTCATAGAAAACTTCTTCAATGCCAGATTCAGATTCTGCAAAATCAGCTCGAGATTCTGCAGAGGACAAAGGCTGATAAATGTGTAGATGAGGGCACATCGTCATCAGATAACAGAGGCAAGAGTGTCATCTCCTCGTCATCTGAATCTGGTCATGGTTATCGTGAGGAGATTCAAGATGGAAAACCATGAATCGGCTGTTTATTTCTGGTTTATGCCTGGAGGAAACTGCCAAATGTGTAGATATAGGAAGAGGAAAAATAGGAGGAAATCGCATTCACAGCATTGCTCTAATGTGACATCTGTTATTCGTGATGATACTAATCTTGTAAATGCATAGTGCCCTTAAAATGATTTATTTTGGTTTTTTCTTTCCTCTTTGGATTGTATGCTCTTGTATTAGCTTTTACAAAAGTTGTCTTTTGATCAGAAAGCGGGGATGTATTGTTTGAGGCTTATTGTTTTCCCTTTGAAGTGGGGATTTATTATCAATGTTTGAGGTTTATTGTTTTTCACTTTTCCTTTTAAAGTGGGAATTTACTATAGAAGAATAATACTCAAGTTTCT 2029 0.4184 MKLKTYAGLSFIATLAIIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCILWQLTKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVPMLSHVRIVSFMGFLLLLDSLFLYSSMKHLIETWQASVSLFFCFEYMILATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSINYGIPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPETGTTAAAGQQGSQSDDHQQGTTGTGSGSTAQTSATDSLSRHQARLQAAAAAASIYEKSYVYPSANSFQTSSEQAQQQFLTSGGPTNISFSPMQHFHFLPSQARAVPVTCGEGFENDPNIPNSQLEAHRKLLQCQIQILQNQLEILQRTKADKCVDEGTSSSDNRGKSVISSSSESGHGYREEIQDGKP 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01515 514 SUPERFAMILY RING/U-box 261 325 - -
Pste1g01515 514 ProSiteProfiles Zinc finger RING-type profile. 281 319 IPR001841 -
Pste1g01515 514 CDD RING-H2_synoviolin 278 319 - -
Pste1g01515 514 MobiDBLite consensus disorder prediction 479 514 - -
Pste1g01515 514 MobiDBLite consensus disorder prediction 329 367 - -
Pste1g01515 514 Pfam Ring finger domain 280 319 IPR001841 -
Pste1g01515 514 MobiDBLite consensus disorder prediction 486 503 - -
Pste1g01515 514 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 325 IPR013083 -
Pste1g01515 514 Coils Coil 447 474 - -
Pste1g01515 514 PANTHER RING ZINC FINGER PROTEIN 1 485 - -
Pste1g01515 514 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 253 328 - -
Pste1g01515 514 SMART ring_2 281 318 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01515 Pste-Chr1 4726342 4733745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01515 1 498 C3H Transcription Factor Family AT3G16090 67.188 0.0 658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01515 1 4726342 4733745 Pste1g01515 1 4726342 4733745 ECH