Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01504 AAAGAAACTAAACGAGAAAGAAAGCCACAAAATTAGTATATTACATTCCAGAGAACCATTTTCTGATTATTCAATTTCATCTGCATTGCATTTGCATTTGATTTCGGCGTTGGATTTTGCAATCAGGAATCAAAATTCGGCAACCGAGGAAGGAGGCGATCGGCAATGAGCAGCGGCGGTGGATCGTCGGACGCGGCGGCGGCGAAGGAGAAGGAGAAGGCTCGCGTGAGTCGAACGTCGCTGATTCTGTGGCACGCGCACCAAAACGACGCCGCGTCGGTGCGTAAGCTTCTGGAGGAGGATCCGTCGCTGGTGAAGGCTAGAGATTACGACAGCCGCACGCCGCTGCACGTGGCTTCGCTCCACGGTTGGGTCGATGTCGCGCAGTGCTTGATCGAATTCGGTGCTGACGTCAACGCTCAGGATCGTTGGAAAAACACTCCTCTGGCTGATGCAGAAGGAGCTGAAAAAATTGCGATGATTGAGCTTTTGAAGTCACATGGAGGCTTGTCTTATGGCCAAACTGGAAGCCACTTTGGGCAGAGGGCTGTTCTTCCCCCATTGCCTAACAAGTGTGATTGGGAAGTTGACCCTTCTGAGCTGGACTTCTCCATTTCAGTTTGCATTGGAAAGGGTTCTTTTGGTGAGATTTTAAAAGCCTATTGGCGTGGAACACCTGTTGCTGTAAAACGTATTCTTCCATCTCTGTCAGATGATAGATTGGTCATTCAGGACTTCAGGCATGAGGTTAATTTACTTGTGAAGCTTCGACACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACTGACAGGAAGCCCCTTATGCTAATTACTGAGTATCTGAGAGGAGGTGATCTTCACAAGTACCTCAAGGACAAAGGTGCACTTAGTCCTTCAACGGCCATCAACTTTGGCTTGGATATTGCTAGAGGGATGGCATATCTTCACAATGAACCAAACGTTATCATTCATCGAGACCTAAAGCCAAGGAATGTTCTTATAGCCAACTCTAGTGCTGACCATTTAAAAGTTGGTGATTTTGGACTAAGTAAGCTTATTAAGGTCCAAAGTTCTCGTGATGTATACAAGATGACGGGTGAAACTGGAAGCTATCGCTATATGGCTCCTGAGGTTTTCAAACACCGGAGGTATGATAAGAAGGTTGATGTGTTCTCCTTTGCAATGATTATGTATGAGATGCTTGAAGGTGAACCCCCTTTCTCAAGTTACGAACCTTATGATGGAGCCAAATATGTGGCAGAAGGACACAGGCCTTCTTTTAAGGCAAAAGGTTATACCCCTGACCTGCGAGAGTAAGTGATTTCTGGTCCTGTGCCTGATTGCTATAGGTTAGAGATGAAAACCATTCGTGCCCTTGAACCTAATAACTTAAGCATCCACTTCCATCTACTCTTAGTTTTACACAAACCCAATGTCTATATTCTTACTGTTTGTGAACTGATGTTAAAGTTAACAGAGCAGTGTTGGTCTGCTGACATGAATCATAGACCTTCATTCATAGATATCCTGAAACGGCTTGAAAAGATCAAGGACAATTTGCCTTCAGATCATCACTGGCACTTGTTCACTTCATGACTATTACCATCCTGCGGGTTGCCTCATCTACTGCTGCGGGGTTTTTGAACCTAGCCAACTTGGAAAACCAAGCTAAGGTCGTGAGCCTTGCTTTGAACTGTTGACTCAAATGAGCATAACAGGTTGATGCCCATTGCGTTTATCAGGTGTTTGTTTACATTTGTTCACTCTCCTGTCTCATTAAAATTCTTGGCGAGTCCCATTCTGCTAATTCAAGTCAGCAGATTCTAGTCATTGCTTAAGTGTAAGATGTAGTGTACAAAACCCATTGAGGAAAAATATAACACATCACGCTATCTACCGTTTAATATTTTATCTTATGTTTAAAATTAATAGTGGTTTCATTTCTT 1946 0.4399 MSSGGGSSDAAAAKEKEKARVSRTSLILWHAHQNDAASVRKLLEEDPSLVKARDYDSRTPLHVASLHGWVDVAQCLIEFGADVNAQDRWKNTPLADAEGAEKIAMIELLKSHGGLSYGQTGSHFGQRAVLPPLPNKCDWEVDPSELDFSISVCIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHKYLKDKGALSPSTAINFGLDIARGMAYLHNEPNVIIHRDLKPRNVLIANSSADHLKVGDFGLSKLIKVQSSRDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMIMYEMLEGEPPFSSYEPYDGAKYVAEGHRPSFKAKGYTPDLRE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01504 383 SUPERFAMILY Ankyrin repeat 27 114 IPR036770 -
Pste1g01504 383 Gene3D - 4 126 IPR036770 -
Pste1g01504 383 Gene3D Phosphorylase Kinase; domain 1 141 227 - -
Pste1g01504 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Pste1g01504 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 382 - -
Pste1g01504 383 ProSiteProfiles Ankyrin repeat region circular profile. 56 88 - -
Pste1g01504 383 ProSitePatterns Protein kinases ATP-binding region signature. 154 175 IPR017441 GO:0005524
Pste1g01504 383 SUPERFAMILY Protein kinase-like (PK-like) 147 372 IPR011009 -
Pste1g01504 383 SMART ANK_2a 56 85 IPR002110 GO:0005515
Pste1g01504 383 ProSiteProfiles Protein kinase domain profile. 148 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01504 383 FunFam serine/threonine-protein kinase STY46-like 141 227 - -
Pste1g01504 383 Pfam Ankyrin repeats (many copies) 42 94 IPR002110 GO:0005515
Pste1g01504 383 Gene3D Transferase(Phosphotransferase) domain 1 228 383 - -
Pste1g01504 383 Pfam Protein tyrosine and serine/threonine kinase 153 371 IPR001245 GO:0004672|GO:0006468
Pste1g01504 383 SMART serkin_6 148 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01504 383 CDD STKc_MAP3K-like 154 370 - -
Pste1g01504 383 PIRSF ILK 1 383 - -
Pste1g01504 383 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01504 Pste-Chr1 4707932 4713135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01504 2 383 MAP Kinase Kinase Kinase AT1G14000 81.586 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pste1g01504 PK_Tyr_Ser-Thr 4.8e-55 CL0016