Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01469 AAAGGACAGAGAACGGGGTAGGTAGGGAAATAAGAGAGGCTAGGAGAAGAACGCTTGTTCTCAACGTGCGTTTAGGAGTGGCTTGGCTGCACCTTCTTCATCATTCTCACCTACCTCTCACACTCCCTCGCTTATATTACCTTTCTCTTTGCCGTTCTCTTTTTTTTCATACGCACTTTAATTTCATTTGTTGTTGGCAAGTAAGAGAAGAAAAAAAATAAAACAACACCATGCTGACGGTAGCTCCGTCTGTTGACGCCACAATAAGTGAACAAAACCAAAACCAAAACCAAAACCACGCGCCCCAAACTACCCATATCTTCAAATCAAAATTACCAGAAATACCAATCTCCAACCACCTCCCACTCCATGGTTACTGCTTCGAGAATCTCTCCCAATTCGCGCACCGCCCCTGCCTCATCCTCGGCGCCGCCGCCTCCAAAACCTACACCTACGCCCAGACGCATCTCATTTCGCGCAAGGTCGCCGCCGGATTCTCCAACCTCGGAATCCGCAAAGGCGACGTCGTCATGATCCTCCTCCAGAACTCCGCCGAGTTCGTCTTCTCCTTCCTCGCCGCCTCCATGATCGGCGCCGTCGCCACCACCGCCAATCCTTTCTACACCGCCGCCGAGATCTTCAAGCAGTTTACCGCCTCCAACGCCAAGCTCATCATCACTCAGGCAATGTACGTCGACAAGCTCCGCCACCACGACGGCACTGCGCTCGGCGAGGACTTCAAGGTCGTAACCGTCGACGATCCGCCGGAGAATTGCCTCCACTTCTCCGTCCTCTCCGACGCGAACGAAAACGACGCTCCGGAGGTGGAGATCCGGCCTGACGACGCGGTCGCCATGCCGTTCTCCTCCGGCACGACGGGATTACCGAAAGGAGTGGTTCTCACGCACAAGAGCTTAACCACGAGCGTGGCGCAACAGGTCGACGGCGAGAACCCTAACCTGTACCTCACCACCGAGGACGTGCTCCTCTGCGTGCTCCCGCTCTTTCACATATTCTCGCTCAACAGCGTGCTATTGTGCGCGCTGAGGGCCGGGAGTGCCGTTTTGTTGATGCACAAGTTCGAGATTGGGACGCTGCTGGAGCTCATACAGCGCCACCGCGTGTCGGTGGCCATGGTGGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAATCCTATGGTCGCCGATTTCGATCTCAGCTCAATACGGTTGGTGCTGTCGGGAGCTGCTCCCTTGGGAAAGGAACTCGAGGAGGCTCTCCGGAACAGGATCCCTCAGGCCGTTTTGGGACAGGGGTACGGCATGACAGAAGCTGGACCAGTGCTGTCCATGTGTTTGGGGTTTGCAAAGCAACCATTCCCTATAAAGTCAGGGTCTTGCGGCACTGTAGTTAGAAATGCAGAACTCAAGGTTGTTGATCCTGAAACTGGGCGTTCTCTTGGCTACAATCAACCTGGCGAAATTTGCATCCGAGGCGAACAGATCATGAAAGGATATCTGAATGATGAGATAGCCACAGCATCAACCATAGATGCCGAGGGTTGGCTCCACACTGGTGATGTTGGCTACGTAGATGATGATGATGAAATTTTCATTGTTGACAGGGTGAAAGAACTCATCAAATATAAGGGCTTCCAGGTCCCCCCTGCAGAGCTTGAAGGGCTTCTTGTAAGCCATCCCTCTATTGCAGACGCAGCTGTTGTCCCACAAAAGGATGTTGCTGCCGGTGAAGTTCCTGTTGCTTTCGTTGTGAGATCGAACGGCTTTGATCTAACTGAAGAGGCTGTAAAAGAGTTTATAGCTAAGCAGGTGGTGTTTTACAAAAGATTACACAAAGTTTATTTTGTTCATGCTATTCCCAAGTCTCCGTCAGGAAAGATACTAAGGAAAGACCTCAGAGCAAAACTAGAAACGGGGGCCATTCAGACGCAAGACTAGAACCTGCCCTCTTTTTTGTTTTTTTGGCAATAATCTTCCATATTTTTTATTTAATATTAGGTCTGACACGTGTAATTGCCGTATCAATGCTTCATGGCATATGGTCCAGTATGTGTGTCTGTAATGTGATTTTAGATCATTAATCTTCAAGACCTTATATTATTAATTGCTTATCAAATCTTTGATAGTCTTCTTGTTATATGTTTTTGTACATGTGGA 2156 0.5037 MLTVAPSVDATISEQNQNQNQNHAPQTTHIFKSKLPEIPISNHLPLHGYCFENLSQFAHRPCLILGAAASKTYTYAQTHLISRKVAAGFSNLGIRKGDVVMILLQNSAEFVFSFLAASMIGAVATTANPFYTAAEIFKQFTASNAKLIITQAMYVDKLRHHDGTALGEDFKVVTVDDPPENCLHFSVLSDANENDAPEVEIRPDDAVAMPFSSGTTGLPKGVVLTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGTLLELIQRHRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALRNRIPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPIKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGEQIMKGYLNDEIATASTIDAEGWLHTGDVGYVDDDDEIFIVDRVKELIKYKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLETGAIQTQD 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01469 568 Gene3D - 460 563 IPR045851 -
Pste1g01469 568 Gene3D - 21 459 IPR042099 -
Pste1g01469 568 Pfam AMP-binding enzyme 54 465 IPR000873 -
Pste1g01469 568 FunFam 4-coumarate--CoA ligase 2 461 562 - -
Pste1g01469 568 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
Pste1g01469 568 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 557 - -
Pste1g01469 568 FunFam Long-chain-fatty-acid--CoA ligase FadD 32 460 - -
Pste1g01469 568 Pfam AMP-binding enzyme C-terminal domain 474 549 IPR025110 -
Pste1g01469 568 SUPERFAMILY Acetyl-CoA synthetase-like 42 561 - -
Pste1g01469 568 CDD 4CL 40 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01469 Pste-Chr1 4636103 4642219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01469 23 472 Monolignol Biosynthesis Gene Families AT1G65060 71.302 0.0 670
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01469 1 4636103 4642219 Pste1g01469 1 4636103 4642219 ECH