Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01466 TGGGGCATTAGGTTCAACTTCCAACTATGGTAGCTCTGTTTTGCAGAGAATGAAATGGTTCACTCAATAAGCTGAGTTCCTTGATACAAGGGCAAAACGCAATGACAGTTGAAAAGAGATTTGTTTTGGTCGGAATTAGAATCGATGCCTATAGCAGACAACTTCTCAACTGGGCTCTTGTCAAAGTTGCCGAACCTGGGGACTGTGTTATCGCAGTTCACGTTGTTAAAAATCCAGATTATGTTTCCAAAAACAAGACTTCGATAGATGGCTATTTAGAAGTTTATGAAGGTCTATGTGGTGTGAGGAAGGTGGGTCTTACCGGTCAAATATTAACAGGAAGCTCCATTCGAAACATTCTTGTTAGAGAAGCAAGAAATCATGCTGCTCTGGCTCTAGTGGTAGGGGGTAGAGCCGGCACAGCCAAATATTGCGCCAAGCGACTACCACCCACCACCAATGTTCTAGCTATTCAGGACTCGAGAATTATCTTCAGGAGGTGCAACAATAAACAACTACCAGGTGGTCTTATACTGGATCCAAGACCAAGTTTAACAACAACCATAGAAAACCTGAGTGACAAAGTAATCCAGTCTGCATTTGGTGATTCCATCGTGGAGACTGAGGAATCAACACACAAAAATTCCTTAGAATTGAAGGAAGAAGAGTTTAACGGATCAGAAAGGAGTAAGTCAAGGTCAATATCCATGTTTGGAGGTGATTTTGCTGAGCAGAAGCTTGGGTGGCCTCTGCTCCGTAGAGCCAATTCTGGAATGTCACAGACCCTTCATGCAAGGGACATGTCCGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCGCGTAAAACTTCTCCCTCTTCTTCCATTGAGGAAAATCCATTTGAAAGGGTCATCAGCGATATCGACGATGAGATCTCTAAAATTTCTTCACCTTCATCTATTGAGCTACCAAATGGCCTAGAGGAGATGCTAAATGTAAACTCACTCAATTGCAACTGGTTCAGCCTTGAGGTTCTCAAGTCTTGCACTAGCCAATTCTCTTCAGAAAACTTGGTTGGAAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTCCCTGATGGAAAGCCGATCGCAGTTAAAGTGTTGCAGTCATCTAAAGAAGCCTGGAAAGATTTTGCTCTTGAGGTAGAGATAATATCCTCATTGAAGCACAGAAGCATTGCCCCTTTACTTGGGATTTGCATAGAGAACAATTCTTTAATCTCTGTTTATGATTATTTCCCCAAAGGCAGTTTAGAGGAAAATCTGCATGGAAAGAACAAGGATAAATCCATCTTGTCATGGGAAGTGAGATTTAATGTGGCTGTCAGGATTGCTGAAGCACTTGATTACCTACACAGGGAAGCTTTGAAGCCTGTTGTACATAAAGATGTCAAATCTTCTAACATTCTTCTCTCCCAAAGGTTTGAACCTCAGTTGTCTGATTTTGGACTTGCAATATGGGGACCAACAGGTTCATCCTTTTTGACTCAAGATGTAGTTGGAACATTTGGTTACCTTGCTCCTGAATACTTCATGTATGGAAAGGTAAGTGACAAGATAGATGTCTATGCCTTCGGTGTAGTGCTACTTGAACTAATATCAGGAAGGGAACCGATCAGTTCAGCAGCTTGCAAAGGACAGGAGAGCTTGGTTGTGTGGGCAAAACCAAAAATAGACAGTGGGGATATTAAAGGCTTATTGGACCCAAATTTAGAAGGGAAATTTGATGAGACCCAATTGCAAAGAATGGTTCAGGCAGCATCCTTGTGCATCACACGGGCTGCTAGACTTCGTCCTAAGCTGAACCAGATAATGAAGATCCTAAAAGGAGAAGAGAAAATTGAATATTTCTTAAACTCCATTGGGAATGATCTGGAGGATTCAGAAAACATTGATGATGAAGTGTATCCAAATTCCAGCGCAGAGTTACACCTGAGTCTTGCATTACTTGGTGTTGACGATGACAGTACGTCACATAGTAGCACGGACCAAAGCTATAGTGAACAGTTGAAAGAACGATGGAGCAGGTCATCAAGTTTTAATTAGTTTCAAGTTTTAATTTAATTACTTGTGCGTGTACAGTTACGTTAAGGAAACAAACACATAAAAGTGAAAAAACAAAGGAGCTGCGCCCCTTGATGAGGTGGTTTGTAGATTTAGATATGGCACTTTTCTTTTCATTTTATCCAGGG 2221 0.4169 MTVEKRFVLVGIRIDAYSRQLLNWALVKVAEPGDCVIAVHVVKNPDYVSKNKTSIDGYLEVYEGLCGVRKVGLTGQILTGSSIRNILVREARNHAALALVVGGRAGTAKYCAKRLPPTTNVLAIQDSRIIFRRCNNKQLPGGLILDPRPSLTTTIENLSDKVIQSAFGDSIVETEESTHKNSLELKEEEFNGSERSKSRSISMFGGDFAEQKLGWPLLRRANSGMSQTLHARDMSVVQWVMTLPDRSPRKTSPSSSIEENPFERVISDIDDEISKISSPSSIELPNGLEEMLNVNSLNCNWFSLEVLKSCTSQFSSENLVGKGGSNRVYKGVLPDGKPIAVKVLQSSKEAWKDFALEVEIISSLKHRSIAPLLGICIENNSLISVYDYFPKGSLEENLHGKNKDKSILSWEVRFNVAVRIAEALDYLHREALKPVVHKDVKSSNILLSQRFEPQLSDFGLAIWGPTGSSFLTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSAACKGQESLVVWAKPKIDSGDIKGLLDPNLEGKFDETQLQRMVQAASLCITRAARLRPKLNQIMKILKGEEKIEYFLNSIGNDLEDSENIDDEVYPNSSAELHLSLALLGVDDDSTSHSSTDQSYSEQLKERWSRSSSFN 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01466 657 SUPERFAMILY Protein kinase-like (PK-like) 295 584 IPR011009 -
Pste1g01466 657 Gene3D Phosphorylase Kinase; domain 1 282 388 - -
Pste1g01466 657 SMART serkin_6 314 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01466 657 ProSiteProfiles Protein kinase domain profile. 314 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01466 657 FunFam Putative receptor-like serine/threonine-protein kinase 389 598 - -
Pste1g01466 657 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 283 388 - -
Pste1g01466 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Pste1g01466 657 MobiDBLite consensus disorder prediction 631 657 - -
Pste1g01466 657 PANTHER OS08G0249100 PROTEIN 186 592 IPR046958 -
Pste1g01466 657 CDD USP_Like 8 104 - -
Pste1g01466 657 Gene3D Transferase(Phosphotransferase) domain 1 389 597 - -
Pste1g01466 657 MobiDBLite consensus disorder prediction 174 195 - -
Pste1g01466 657 MobiDBLite consensus disorder prediction 174 200 - -
Pste1g01466 657 Pfam Protein kinase domain 316 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01466 Pste-Chr1 4633295 4636556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01466 302 656 Trihelix Transcription Factor Family AT1G70460 39.335 5.01e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste1g01466 Pkinase 1.5e-39 CL0016