Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01459 CGCTGAATGAAACCCCTCAGACATACTCTGATCCCTTGTCACACAAACCCTAGTCCCTCTCTCACACACCAGAACAGAACAGATCACACACATAACACCCCGCCCCAAACAAAGAGCCACAGTTGTGCGGGTCTGCAGGCGTCTCTCTCTTGTCAGCACCAACTGTGTTGTTTGTTTCGATTGTTCGAGTCTTCCGAGTTGAAGCGAAGATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCGGCTGTTATGAAATATGGTAAGAATCAGTGGGCTCGAATCTCTTCACTCCTTGTTCGCAAATCTGCCAAGCAATGCAAAGCTCGCTGGTATGAGTGGCTTGATCCCTCCATAAAAAAGACTGAGTGGACGAGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTATGCCCACACAATGGAGAACAATTGCTCCAATTGTGGGCCGTACCCCTTCCCAATGTCTTGAGCGATATGAGAAACTCCTTGATGCAGCCTGTGTGAAAGATGAGAACTATGAGCCTGGTGATGATCCTCGAAAATTGCGTCCTGGGGAGATTGATCCAAACCCTGAGTCAAAACCTGCACGGCCAGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGGTTAGCCAACACAAAGGGAAAGAAAGCAAAAAGAAAAGCTAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCTTTACAAAAGAAGAGGGAATTGAAGGCTGCTGGAATTGATATTAGGCAGCGGAAGAGAAAAAGGAAAGGAATAGACTACAATGCAGAAATTCCATTTGAAAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAAGATAGACCAGTGGAACAGCCCAAATTCCCTACTACAATTGAAGAACTTGAAGGGAAAAGGAGGGTTGATGTTGAGGCACAATTAAGAAAGCAGGACATTGCAAAAAATAAAATTGCCCAAAGGCAAGATGCCCCATCTGCTATCTTGCATGCCAACAAGCTGAATGACCCTGAAACAGTAAGAAAGAGATCAAAATTGATGCTTCCACCACCCCAGATTTCTGATCAGGAATTGGATGAAATTGTAAAGTTGGGTTATGCTAGTGACCTTGCTGGGAGTCAGGAACTTGCTGAAGGTAGTAGTGCAACACGTGCACTTCTGGCTAATTATGCACAAACACCTAGCCAGGGAATGACTCCTTTGCGTACCCCTCAGAGAACACCAGCTGGCAAAGGAGACGCTATCATGATGGAAGCTGAAAATCTGGCTAGGTTGAGGGAGTCCCAAACACCATTGTTAGGAGGAGAGAATCCAGAGTTGCATCCTTCAGATTTTTCTGGTGTCACTCCTAAGAAAAAGGAGATTCAGACTCCAAATCCAATGCTGACTCCTTCAGCAACTCCTGGAGGTGCAGGTCTCACTCCTAGAATTGGAATGACCCCAACAAGAGATGGTTTTTCTTTTAGCATGACACCAAAGGGAACTCCTCTTAGGGATGAACTTCATATCAATGAGGACATGAATATGCATGACAGACTTGAGCTACAGAGACAGGCTGATATGAGAAGAAGTTTGCGTTCTGGTTTAGGAAGTCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAGTTCCAGAAGATACTGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGACAGAATTGCCAGAGAAAAAGCAGAAGAAGAGGCAAGGCAACAGGCATTACTTAGAAAACGATCAAAAGTTCTTCAAAGGGAACTTCCTAGGCCTCCTGTCGCATCATTGGAGCTTATAAGAAATTCCTTGATGAGAACTGATGGAGACAAGAGTTCCTTTGTTCCACCAACTTCTATTGAGCAAGCTGATGAGATGATCAGAAGGGAGCTTCTAATTTTACTGGAGCATGACAATGCTAAGTATCCGCTTGATGAGAAAGTGAATAAGGAGAAAAAGAAAGGGGCCAAGCGCACCGCTGATAAGTTGATAAAGGAAGAGGCTCAGTATCTTTGTGCAGCAATGGGACATGAAAGTGAACCCCTTGATGAATTTATTGAAGCACACAGAACCTGTCTCAATGATCTTATGTACTTCCCAACTCGTAATGCATATGGTCTTTCTAGTGTTGCTGGGAACATGGAAAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAACAAATTGGATGACGATAAGGAGAAGATGGTACGGCTTGAGAAGAAGGTGATGGTTCTCACACAAGGCTATGAGATGAGAGTAAAGAAAAGCCTCTGGCCACAAATTGAGTCTACTTTCAAGCAGATGGACATAGCTGCAACTGAGTTAGAATGCTTTAAAGCTTTGCAAAAGCAGGAGCAATTAGCAGCATCACATAGGATAAACAATCTGTGGGCCGAAGTACAAAAGCAAAAGGAACTTGAGAAAACTCTGCAAAATAGGTATGGGAGTCTAATTGAAGAGCTGGAAAAGATGCAAAATATCATGAACCAATGCAGATTACAAGCACAACAAGAAGAAATTGAAGCAAACAACAATGCTCGGGAGTCAATTGAGACTACCGAGACAATGGCTAATGAAAATGTACAGGGTACAGAAAATTGTGAAGCTGTACCTCATTCGCTAGAACATGGACATGTTCTAGCAGTTGAGTCATCTGATGATGGAGCTGTTGACCAGCAACTAGATACTGTGCAAGAACAGGGTACTTCTAGCCCCAGTCATGACATGGATGTGGATTCAAATAAAATGCAAATGATGCACGACAGTGATGTTAAATTGCCAAATGATACACTTTCTGTAGAGAATGTTGATGAAAAGGTGGAAAGTATCAGTACAGACAATGGAGAGCCCATGCTAGAAATAGGTGCTGCAGAAACAAGTGTCCTCAATCGTGATATTGTGGATGCTGTAGACTCACATGATAACAGTATAGAAGAAATCGATCCTGTTGGAGAGGAGACAAATTAGGCTGGACACTGCCTAGCCTGTTCTTATATTGAAGTATGGGGGACATTAGGTTGGGTAGTTTCTCAATTCAGATTTCAGTGGCTATTTAACTGAATTAATTGCATGAAGCTTGGGTCCTCCTTTGTTGGCTTGATGCTTGTGATAATCTCTGGCCTAAAGTTTGACACATATGAATTGATAAACCGCATGAGTATTTTGAGATGGTTCTCCATATTATTTT 3258 0.4316 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRKRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIVKLGYASDLAGSQELAEGSSATRALLANYAQTPSQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGLTPRIGMTPTRDGFSFSMTPKGTPLRDELHINEDMNMHDRLELQRQADMRRSLRSGLGSLPQPKNEYQIVMQPVPEDTEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPVASLELIRNSLMRTDGDKSSFVPPTSIEQADEMIRRELLILLEHDNAKYPLDEKVNKEKKKGAKRTADKLIKEEAQYLCAAMGHESEPLDEFIEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRNKLDDDKEKMVRLEKKVMVLTQGYEMRVKKSLWPQIESTFKQMDIAATELECFKALQKQEQLAASHRINNLWAEVQKQKELEKTLQNRYGSLIEELEKMQNIMNQCRLQAQQEEIEANNNARESIETTETMANENVQGTENCEAVPHSLEHGHVLAVESSDDGAVDQQLDTVQEQGTSSPSHDMDVDSNKMQMMHDSDVKLPNDTLSVENVDEKVESISTDNGEPMLEIGAAETSVLNRDIVDAVDSHDNSIEEIDPVGEETN 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01459 942 Gene3D - 5 59 - -
Pste1g01459 942 Pfam pre-mRNA splicing factor component 406 633 IPR021786 -
Pste1g01459 942 CDD SANT_CDC5_II 55 106 IPR047240 -
Pste1g01459 942 MobiDBLite consensus disorder prediction 399 413 - -
Pste1g01459 942 Gene3D - 60 114 - -
Pste1g01459 942 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Pste1g01459 942 MobiDBLite consensus disorder prediction 380 421 - -
Pste1g01459 942 MobiDBLite consensus disorder prediction 213 234 - -
Pste1g01459 942 Coils Coil 167 187 - -
Pste1g01459 942 SMART sant 58 105 IPR001005 -
Pste1g01459 942 SMART sant 6 55 IPR001005 -
Pste1g01459 942 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 782 IPR047242 GO:0000398|GO:0000974
Pste1g01459 942 FunFam CDC5 cell division cycle 5-like 60 120 - -
Pste1g01459 942 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Pste1g01459 942 Coils Coil 761 807 - -
Pste1g01459 942 Coils Coil 661 695 - -
Pste1g01459 942 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Pste1g01459 942 CDD SANT 10 53 IPR001005 -
Pste1g01459 942 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Pste1g01459 942 Pfam Myb-like DNA-binding domain 10 70 - -
Pste1g01459 942 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Pste1g01459 942 FunFam CDC5 cell division cycle 5-like 5 59 - -
Pste1g01459 942 MobiDBLite consensus disorder prediction 113 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01459 Pste-Chr1 4598322 4605135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01459 1 803 MYB-Related Transcription Factor Family AT1G09770 76.598 0.0 1228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g01459 Myb_Cef 3.1e-53 No_clan