Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01457 CATCATCTAATAATATATAACACTTTTTCATCATTCTCATCTCATCAACGTTAACATGTCCATTCTCAAACTTGTTTTCATTACCATCATCACTGTTTCATTGCCCATTGCTTCCATCGCCAAAGACAAATCCAAGAAGCCTGTCACTTATGATGGCAGGTCCATCATTATCGATGGAAAACGGGAGCTTCTCTTCTCAGGTTCCATCCATTACCCACGAAGCCCTCCCGAATCATGGCCTGACATTCTTGACAAAGCAAAACATGGAGGTATAAACGTGATACAAACCTACGTCTTCTGGAACATTCATGAACCTGAGCAAGGCAAGTTCCGAATTGACCCGGAGTATGATTACATAAAGTTCATGAAGCTCGTTCATGAGAAAGAAATGTATATAACCCTCAGGCTTGGGCCTTTCATCCAAGCTGAATGGAATCACGGAGGACTTCCATATTGGTTAAGAGAGATCCCTGAAATCATATTCCGCTCTAACAATGAACCGTTTAAGATTGAGAATGAGTACAACCATATCCAACGTGCTTTTAGAGAGCAAGGAGATAATTATGTCCTATGGGCGGCGAAGATGGCAGTGTCACTGGATGTTGGAGTTCCATGGATCATGTGCAAGCAGACAGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGTGGTGATACCTTTGCTGGGCCCAACAAACCTTACAAACCTTCCCTATGGACTGAAAACTGGACTGCTCAGTATAGAGTGTTTGGAGATCCACCATCCCAAAGATCAGCAGAAGACCTTGCCTTCTCAGTTGCTCGCTTCTTCTCTAAGAATGGGTCTTTGGTCAACTACTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGCTCTGCCTTCACTACAACCCGATATTATGATGAAGCCCCTATCGATGAGTTCGGTCTTCAGAGAGAACCAAAATGGAGTCACCTGAGGGACGTGCACAAGGCATTGAACCTATGCAGGAAGGCCCTCTTCACGGGTGGCTCTACCGTCACAAAACTGAGCCAACATCATGAGACTATAGTTTTTGAGAACCCAGCAAGTGGTTTATGTGCTGCTTTCATCACTAACAACCACACCAAAGCACCAACGACCATCCATTTCAGGGGTTCCGATTATTATCTGCCACCACGTTCTATTAGCATCCTCCCTGACTGCAAGACTGTGGTCTTCAATACTCAACAGATTGTTTCACAGCATAATTCAAGGAACTTCAAGAGGTCAACGGAAGCAAACAATCATAAGTGGGAGGTGTTTTCTGAGTCCATTCCAAATACCAAGCATATTCCTATCAAAGATAAGGTTCCTACAGAGCTTTATATCTTGCTTAAAGACGCCAGCGATTATGCATGGTACACCACCAGCGTAGAATTGGGTCCAGAAGACTTGCCAAAAAAGAATCTATCCCCCGTTCTTCGTATTTTGAGTCTTGGCCATTCATTGCTTGCCTTTGTAAATGGAGAATACATCGGATCAAATCATGGCTCCCATGAAGAGAAAGGTTTTGAATTCCAGAAACCTGTAACCTTCAAGATTGGAATTAATCACATAGCTATCTTGGCTTGCACCGTGGGACTCCCCGACAGTGGAGCATACATGGAGCACAGATTCGCTGGACCCAAGTCTATACTCATCCTTGGTCTCAGCTCTGGAAAAATTGACCTGACTTCTAATGGTTGGGGTACAAAGGTTGGTGTCCAAGGCGAGGACCTTGGCATTTTCACTGAGGAGGGATCAAAGAAAGTAGAATGGAAAGAATCCAAGGGGCCAGGACAGGCAATCTCCTGGTACAAGACAAATTTTGCAACCCCAGAGGGAAAAGAACCTGTTGCCATCAGGATGAATGGTATGGGGAAGGGAATGGTTTGGATCAATGGTAAAAGCATTGGTCGTTACTGGATGAGCTACCTATCTCCTCTTGGAATGCCTACTCAGTCAGAGTACCACATCCCAAGAACTTTCCTCAAACCAAAAGACAACTTGCTTGTTATATTTGAGGAAGAGGTAGCACATCCAGAAAAGGTAGAAATCCTAACTGTTGACAGAGATACAGTATGCAGTTTCCTCACAGAGAATCACCCCCCCAATGTCAAGACATGGGCAAATAAGCAAGAGAAATTCCAGGTAGTTGTGGATAGAGTGGGGCCAGCAGTTATTCTCAAATGTCCACACGGAAAGACCATTAAGGTTGTGGAGTTTGCAAGCTTTGGTAATCCTGAGGGGGTCTGTGGAAACTATACTTTAGGCAATTGTGATGCACCTTCCACCAAGCATATTGTTGAGAAGCATTGCCTAGGAGCACCATCTTGCGTTGTTCCTTTCGTCAAGGAAACCTTCAACAAGGGCCAAGATACTTGCCCAGATGTGACGAAGGCACTTGCAGTCCAAGTTCTCTGCGGCTTCTAAACCTGTCTTTAGGTCCAAGTAGAGTTGGGTGGCTACGTTAGTGATTTGATTCGTCAGATGGAGTCCGTAAGCTTAAATTTTAGTTAGTTTTTCTTTTGTAGCACATGATACCTGAAATCGGTGTCTTTACTTAACAAACAACATTTTGTTTGTTCTGTTTACATTAAAAATGTAGAAAACCTATCACCAAACTTCAATTGTTTCATATTCAAC 2659 0.4359 MSILKLVFITIITVSLPIASIAKDKSKKPVTYDGRSIIIDGKRELLFSGSIHYPRSPPESWPDILDKAKHGGINVIQTYVFWNIHEPEQGKFRIDPEYDYIKFMKLVHEKEMYITLRLGPFIQAEWNHGGLPYWLREIPEIIFRSNNEPFKIENEYNHIQRAFREQGDNYVLWAAKMAVSLDVGVPWIMCKQTDAPDPVINACNGRHCGDTFAGPNKPYKPSLWTENWTAQYRVFGDPPSQRSAEDLAFSVARFFSKNGSLVNYYMYHGGTNFGRTSSAFTTTRYYDEAPIDEFGLQREPKWSHLRDVHKALNLCRKALFTGGSTVTKLSQHHETIVFENPASGLCAAFITNNHTKAPTTIHFRGSDYYLPPRSISILPDCKTVVFNTQQIVSQHNSRNFKRSTEANNHKWEVFSESIPNTKHIPIKDKVPTELYILLKDASDYAWYTTSVELGPEDLPKKNLSPVLRILSLGHSLLAFVNGEYIGSNHGSHEEKGFEFQKPVTFKIGINHIAILACTVGLPDSGAYMEHRFAGPKSILILGLSSGKIDLTSNGWGTKVGVQGEDLGIFTEEGSKKVEWKESKGPGQAISWYKTNFATPEGKEPVAIRMNGMGKGMVWINGKSIGRYWMSYLSPLGMPTQSEYHIPRTFLKPKDNLLVIFEEEVAHPEKVEILTVDRDTVCSFLTENHPPNVKTWANKQEKFQVVVDRVGPAVILKCPHGKTIKVVEFASFGNPEGVCGNYTLGNCDAPSTKHIVEKHCLGAPSCVVPFVKETFNKGQDTCPDVTKALAVQVLCGF 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01457 796 Gene3D Glycosidases 151 315 - -
Pste1g01457 796 Gene3D Glycosidases 19 150 - -
Pste1g01457 796 SUPERFAMILY (Trans)glycosidases 29 315 IPR017853 -
Pste1g01457 796 PANTHER BETA-GALACTOSIDASE RELATED 151 720 IPR001944 GO:0004553|GO:0005975
Pste1g01457 796 Pfam Beta-sandwich domain in beta galactosidase 319 391 IPR041392 -
Pste1g01457 796 SUPERFAMILY Galactose-binding domain-like 375 534 IPR008979 -
Pste1g01457 796 Pfam Glycosyl hydrolases family 35 36 151 IPR031330 -
Pste1g01457 796 CDD Gal_Rha_Lectin_BGal 703 794 - -
Pste1g01457 796 SUPERFAMILY Galactose-binding domain-like 553 700 IPR008979 -
Pste1g01457 796 Gene3D - 559 683 - -
Pste1g01457 796 Gene3D - 387 526 - -
Pste1g01457 796 ProSiteProfiles SUEL-type lectin domain profile. 707 795 IPR000922 GO:0030246
Pste1g01457 796 FunFam Beta-galactosidase 557 681 - -
Pste1g01457 796 Pfam Galactose binding lectin domain 715 794 IPR000922 GO:0030246
Pste1g01457 796 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Pste1g01457 796 PRINTS Glycosyl hydrolase family 35 signature 587 601 IPR001944 GO:0004553|GO:0005975
Pste1g01457 796 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Pste1g01457 796 PRINTS Glycosyl hydrolase family 35 signature 614 630 IPR001944 GO:0004553|GO:0005975
Pste1g01457 796 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Pste1g01457 796 Gene3D - 700 796 IPR043159 -
Pste1g01457 796 Pfam Beta-galactosidase jelly roll domain 577 659 IPR025300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01457 Pste-Chr1 4593625 4598395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01457 30 795 Glycoside Hydrolase AT2G16730 59.227 0.0 1006