Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01455 CATGTCGGAGAGGACACGTGGAAATCAAAACCATGGCTGACATGATAGCATACGAATTTCTGGCACACAAATGCGAACCATTCAGTTGGGCCCACAAGAAATCAAACTTCGATTTTTTAATAATAATAAAAACAAAACATAATGGGCGTGTTTCTATGTTCTGTTTCTTTGCGTTGCGCCTCGTAAAAACTGGCAGACAAAAAAAAGAAATATTGGGGGTGGAAGCTTTGAGAGACAGATGCTTCTTCGTCAGAGCTACTAGTGACACCTTGTTGGATATCTGTTTCAACACTCTAATGGCTCTTCCTGGTTCCCTGCAGTTGTCCCATGGTTTGGGACTTTGCAGGAACCTGGGCTGCAATGACCATTCGAGGGCAACAGGACGTAGTAAATTACATTTATTTAGTGCTGGTCCTTCATATCCCATTTCATGTCAGGCCAACCAAATAAGCTTCCAGCTGTTAAGGCGGCTGCTACAGTGCTGGCTAGTATGGGGTGTTGGTCCATTATTGTTTCAGACAAGGAAAATACTTTTTCAGAGAAGTGATACTAGTTGGAAGAAAAGTACCACTCACTATGTAGTAACTTCTTACCTTCAGCCATTACTTTTATGGACTGGAGCAATACTTATTTGCAGAGCATTGGAGCCATTAATTCTACCTTCAGAAACAAGCCAGGTTGTTAAGGAACGGCTTTTGAATTTTTACTGGCCTTCGCCTATTGTTTGTCAAGGTGTGCCTATTTCCTTGCCTTCATTTGATCTCTTAAAATTGATGAGGCACCTAAGCACTTTAGTTCTTTGCACTTTCCTTCTTCTTTTAAGAGAGAAATTGTCTGATTTCTTTTTTTTTATGACCAATTGTGATACCTTACATACATATTTATTGTCTCACAGCTTTTTATTTGCTTTATCATGGGACATGGGACCATTCAACTATAATGCTTTCAAGATTACCATTTTTATAGCCGGCTTGCTTCAGTCTGATTTTGTAATTCAACAAGCGCAGAAATTCTTAGCAGAGGGTACTGATGCAAGTGAGGCGAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTACTCTGCTGTGTGGATTGCTGCCTTTTCACTGTTCATGGAATTGCTGGGCTTTTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTGATGATTCACGCAACTCGGCCTTTTGTGCTTAATGAATGGATTCAAACAAAGATAGAAGGATATGAGGTTTCTGGTACTGTTGAGCATGTTGGCTGGTGGTCACCAACAATTATCAGAGGTGAAGATCGTGAAGCAGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGAAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAATATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTCTGGACAACATAAATCCTGAAAATCAGGCTCTACTGATTTTGGTGTCTTGTTTTGTTAAGACCTCCCATTTTGAAGAATATCTGTGTGTTAAGGAAGCTATACTGTTGGATCTTCTTAGAGTTATTGGCCATCACCGAGCCCGACTCGCAACACCAGTCCGTACCTTGCAGAAGATATACAGTGATGCTGACTTGGAGAACATACCATTTGCAGCAGATTCCACATTTGGTCGTGGTGCCGGGACGGTACCTAATCGCCCATTATTAGTAATTGAACCATCTTACAAGATCAATGGAGATGATAAGTTGAAAAGTCGATCAACACGAGCAGCTGTTGATCAAGATAACAAGCGAACCAAACCTGACACCGTGGTTAGAGGAACTCATGATGACACTGAGGTAGATACCAAAGTTGTGACACCTAACTCTGATGCAAATGGAAACTCTAAGAAAGTTGTTACACCCAAACCTGATCCTGAAGTGAGTGAAAACAAGACAGTGAAATCAGATTCAAACAAGGAGAATACGGAGGTGCTAGAATTTTCTAAATCCAAAGTAACTGGCTCTGTAGTAGATAATTCCACCCTGAAGGACATTGATGTCAAACAATCCAAGAGTCAGACCACTAAAAACATAAAGCCAAATATTGACTCTGACAATGTAGTGTCCTCCTCAACTAACAATGCTGACAAAACAGGTGGACTTAATACAAATATGCCAACAAAACAGGTAGGGGAAAAGAAACCTGCTGCACAGGCTCATGCAGCCAGGACTGTTCTTGAAGAGAATATTGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCCATTGGTGAGGGGATTGATAATGTGACATCTCGAGACGCAAAGGAAATGGCTGCATTCCAGGGTGGAAATGGATCTCCAAAGGCTTCAGATGGAAATGACAAGTAGTCGCTCTAAGCAGTGAGTTCAACTAGCTTGTTTGGATTATGTTTCAAACCACTAAAAGTACGTTCATTCTTGTTGCAGTGGAAGTAACTTACCTGCATGGTTTGATGCAAAAGGAATTTTGAAGGTTTCTAACGGTACCAAAAACATGCTATTAGTTGTTTGAAAGCTCAATATTCCAAATGTAATACACCGCATTGAACCAGTTTCCCACCCTTGGGAAGTTGTATATAGTATCATTTCATCTATCATACACCCCTTTTACAAAGGAATCTTGAGCTGTATTGTCATATCATTTCATTAATTCATTCTTTTTGCTGTTTAAACTATACATGAAATAGAGCATTCTTCAATCATTCGATTATACTG 2861 0.4034 MADMIAYEFLAHKCEPFSWAHKKSNFDFLIIIKTKHNGRVSMFCFFALRLVKTGRQKKEILGVEALRDRCFFVRATSDTLLDICFNTLMALPGSLQLSHGLGLCRNLGCNDHSRATGRSKLHLFSAGPSYPISCQANQISFQLLRRLLQCWLVWGVGPLLFQTRKILFQRSDTSWKKSTTHYVVTSYLQPLLLWTGAILICRALEPLILPSETSQVVKERLLNFYWPSPIVCQGVPISLPSFDLLKLMRHLSTLVLCTFLLLLREKLSDFFFFMTNCDTLHTYLLSHSFLFALSWDMGPFNYNAFKITIFIAGLLQSDFVIQQAQKFLAEGTDASEARNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFAADSTFGRGAGTVPNRPLLVIEPSYKINGDDKLKSRSTRAAVDQDNKRTKPDTVVRGTHDDTEVDTKVVTPNSDANGNSKKVVTPKPDPEVSENKTVKSDSNKENTEVLEFSKSKVTGSVVDNSTLKDIDVKQSKSQTTKNIKPNIDSDNVVSSSTNNADKTGGLNTNMPTKQVGEKKPAAQAHAARTVLEENIVLGVALEGSKRTLPIGEGIDNVTSRDAKEMAAFQGGNGSPKASDGNDK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01455 820 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 151 806 IPR045042 -
Pste1g01455 820 MobiDBLite consensus disorder prediction 716 749 - -
Pste1g01455 820 MobiDBLite consensus disorder prediction 608 645 - -
Pste1g01455 820 MobiDBLite consensus disorder prediction 798 820 - -
Pste1g01455 820 Pfam Mechanosensitive ion channel 347 553 IPR006685 GO:0016020|GO:0055085
Pste1g01455 820 Gene3D - 304 404 - -
Pste1g01455 820 Gene3D - 406 461 IPR023408 -
Pste1g01455 820 MobiDBLite consensus disorder prediction 664 683 - -
Pste1g01455 820 SUPERFAMILY Sm-like ribonucleoproteins 390 460 IPR010920 -
Pste1g01455 820 MobiDBLite consensus disorder prediction 608 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01455 Pste-Chr1 4583167 4590705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01455 320 820 Mechanosensitive Ion Channel Family AT5G10490 59.684 0.0 550